Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0410 ATGGCATTCGATGACTTCTTCACCGGCGAAATCGTCACCGAGCTTCTAAAGATGCTAGTAAACATTTCACGCAAGTCCCTTCTATGCAGATCAAGTGCTGTACAACTCATAACTTATATCCATGAACTACAACCTACTATAGATGAAATCAAATATTCCGGTGTTGAACTTTCCGAGCACCGTCAGTTTCAGCTTAACCGTGTATCCGAGGTGCTGCGCTCCGGCGTTGATCTATCTCTCAAGGTCCTATCATCAAGCCGTTGGAACGTGTATAAGAACTTGCAACTTGCTAAAAAGATGGAGAAACTTGAGAAGAACTTGTCAAAGTTCATTCAGGGTCCCATGCAGGCTCATATATTAGCTGATGTGCACCATACTCGGTTTGAAATGGCGAAACGATTCGATCAAGTGGAGGCGTCTCATCGGAAGTTGGAGTGTTACTTTGGTGCCATGAAGATTGGGGTGGGTGGAGGAGGGTGGGTGCAGGAAGCTGTGAGGAGCATGGAGGAAGATGAGAGTTGTTGGGGTGAGGGTAGTTCTGGGAATTTTGGGGTGGCTTTAGAGTTGGGGAAGAAGAAAGTTAAGGAGATGATTATTGGAAGAGAGGATCTTAAGGTTATTGGGATTAGTGGGATTGGTGGATCTGGGAAAACCACTCTTGCAAGAGAGGTCTACAGAGATGATCAAGTTCGAAGTTATTTCAAAGAGAGAATCTTGTTCCTGACTGTGTCTCAATCCCCAAATGTCGACCAGATAAGAACAAAAATATGGGGGTTTATCATGGGAAATCAAAATTTGAATGCCAATTATGTCGTACCGCAATGGATGCCCCAAGTTGAATGCAGAAACGAAGCTCCTCGACGCCTGATAGTTCTAGATGATGTTTGGTCTCTTTCTATCTTGGGGCAGTTTTTGTATAAAAGTCCAGGTTGCAAATATGTTGTGGTATCCAGAGAAAGATTTCAAACAATTTGTGATGCCACTTATGAAGTTGAATTGTTGAATGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCATTTGGACAGAAATCAATACCTTTCGCTGCTAATGAGAATTTGGTCAAGCAGGTTGCGACTGAGTGTGGAAGGCTTCCACTGGCACTAAAAGTGATAGGAGCTTCTTTGAGGGATCAGGCTGAAATGTTTTGGCTAAGTGTTAAAAACAGGCTATCTCAAGGCCAAAGCATTGGGGAATCATATGAAATCAATTTGATTCATAGGATGGAATTTAGCACCAATTACCTACCTGAAAAGATCAAGGAGTGTTTCTTGGACTTGTGTTCGTTTCCCGAGGATAAGAAGATTCCTCTAGAAGCTCTCATTAATATGTGGATTGAAACACATGATATTGATGAAACAGAAGCATTTGCTATTGTTGTTGAGCTCTCAAACAAGAATCTTCTCACCTTGGTGAAAGAGGCACGTGCTGGAGGAATGTACAGGAGCTGCTTTGAGATCTATGTTATTCAACATGATATACTAAGAGACCTTGCTCTTAATATGAGCAATCGTGGCAGCATCCGTGAACGCAGACGACTAGTTATGCCAAAACGAGAAGAACATGGAAGACTCCCTAAAGAATGGTTGAGAAACATGGATAGGCCATTTGAGGCTCAAATTGTTTCAATTCACACAGGTGAAATGAAAGAAGAGGGCTGGTGTAAACTTGAATTTCCTAAAGCTGAAGTGCTGATTATCAATTTCACATCTAATGAATACTTTTTACCACCCTTCATTGATAGAATGCCAAATTTGAGGGCATTAATAGTAATAAACTACAGTGCATCATATGCAAGCCTTCACAATGTTTCAGTTTTTAACAATTTGTTTAACTTGAGAAGCTTGTGGCTTGAAAAAGTTTCCACACCTAAGTTATCAGGTCTTGTATTAAAAAACTTAGGCAAATTATTCATAGTCCTCTGCAAGGTAAATAACAATTTGGAAGGGAATGGGGCAAATATGGCTCAAACTTTCCCCAATCTATCTGAACTCACTCTTGATCACTGTGACGATGTAACCGAACTTCCCTCGAGCATTTGCGAAATCAAGTCACTTCAGAACTTGAGTCTCACCAACTGCCACAGTTTGACTCAACTTCCTAATGAATTAGGAAGACTAAGATCTCTAGCAATTCTCCGGTTATATGCTTGTCCGGATTTGAAAACACTTCCTCCTAGCATATGTAACATGATTAGGCTGAAGTATATTGATATATCACAGTGTGTTAACCTTGCAAACTTCCCTGAGGAGATTGGTAAGTTAGTAAACTTGGAGAAGATTGATATGAGGGAATGTTCCATGATGAGTAATTTACCAAAGTCTGCAGTGTCAATGAAGTCTTTGAGGCTTGTAATTTGTGATGAAGAGGTATCTGGAATGTGGAAAAATGTTGAGAAGGCCAAGCCAGATTTGCATATTCAAGTATCAGAGCAGGACTATGATCTGGACTGGCTTAAGGAGTGA 2487 0.4101 MAFDDFFTGEIVTELLKMLVNISRKSLLCRSSAVQLITYIHELQPTIDEIKYSGVELSEHRQFQLNRVSEVLRSGVDLSLKVLSSSRWNVYKNLQLAKKMEKLEKNLSKFIQGPMQAHILADVHHTRFEMAKRFDQVEASHRKLECYFGAMKIGVGGGGWVQEAVRSMEEDESCWGEGSSGNFGVALELGKKKVKEMIIGREDLKVIGISGIGGSGKTTLAREVYRDDQVRSYFKERILFLTVSQSPNVDQIRTKIWGFIMGNQNLNANYVVPQWMPQVECRNEAPRRLIVLDDVWSLSILGQFLYKSPGCKYVVVSRERFQTICDATYEVELLNEEDALSLFCHHAFGQKSIPFAANENLVKQVATECGRLPLALKVIGASLRDQAEMFWLSVKNRLSQGQSIGESYEINLIHRMEFSTNYLPEKIKECFLDLCSFPEDKKIPLEALINMWIETHDIDETEAFAIVVELSNKNLLTLVKEARAGGMYRSCFEIYVIQHDILRDLALNMSNRGSIRERRRLVMPKREEHGRLPKEWLRNMDRPFEAQIVSIHTGEMKEEGWCKLEFPKAEVLIINFTSNEYFLPPFIDRMPNLRALIVINYSASYASLHNVSVFNNLFNLRSLWLEKVSTPKLSGLVLKNLGKLFIVLCKVNNNLEGNGANMAQTFPNLSELTLDHCDDVTELPSSICEIKSLQNLSLTNCHSLTQLPNELGRLRSLAILRLYACPDLKTLPPSICNMIRLKYIDISQCVNLANFPEEIGKLVNLEKIDMRECSMMSNLPKSAVSMKSLRLVICDEEVSGMWKNVEKAKPDLHIQVSEQDYDLDWLKE* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0410 828 Pfam NB-ARC domain 192 411 IPR002182 GO:0043531
Lan5g0410 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 434 IPR027417 -
Lan5g0410 828 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 132 IPR008808 -
Lan5g0410 828 Gene3D - 418 505 IPR036388 -
Lan5g0410 828 Gene3D - 185 329 IPR027417 -
Lan5g0410 828 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 825 IPR044974 GO:0006952
Lan5g0410 828 SUPERFAMILY RNI-like 569 790 - -
Lan5g0410 828 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 825 - -
Lan5g0410 828 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lan5g0410 828 Gene3D Ribonuclease Inhibitor 550 811 IPR032675 -
Lan5g0410 828 Gene3D - 333 417 IPR042197 -
Lan5g0410 828 PRINTS Disease resistance protein signature 206 221 - -
Lan5g0410 828 PRINTS Disease resistance protein signature 282 296 - -
Lan5g0410 828 PRINTS Disease resistance protein signature 369 383 - -
Lan5g0410 828 PRINTS Disease resistance protein signature 688 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0410 Lan-Chr5 8931333 8935338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0410 574 826 Receptor kinase-like Gene Family AT1G08590 23.922 2.87e-09 58.9