Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0098 ATGTCGGAAGCAAAAGACCCTGCGATCAAGCTCTTTGGGAAGACAATTCCGGTGCCGGAGATACCTGCCGGATCCGGTGACTCTAACAAAGACCCACCTTTATCTTCCGGTGATGTTTTTGATCAGAATCATGCTTCTTCTAGCAACTCTTCTGATAGAGGAGAAGAAGAGCTTGAGATTGAGCAGGACACAATGGGAGAGAAACCAACGGAGGATAAGATGGAAGATGTTACCCAATCATCGGAAGAGGTCACCAATTTTGATACGGCTTCAAGATCAGGTGAAGCATCTGTAACCCCCGCCACTGAGAAGGAGGCTACTACGTTGGAAACTTCAAGGGCTGAAGAAGAGTATGGTGAGAATTCACAAGAAATGACGCTGAAAAAGCCAGACAAAATACTACCTTGCCCCCGTTGTAATAGCATGGACACCAAGTTCTGCTACTTCAACAATTACAACGTCAATCAACCGCGCCATTTCTGCAAGAATTGCCAGAGATACTGGACTGCTGGTGGGTCCATGAGGAATGTGCCTGTTGGTGCTGGTCGACGGAAGAATAAGAACTCCATCTCTCACTTTCGTCAGATAACTGTTCCCGAAGCAGCACTCCAGAATCCTCAGTCAAATGGTGTTCATTATCCTTCCTTGAAATCTAATGGCACAGTCCTTACATTTGGATCTGATACACCCTTGTGTGAATCTATGGCATCTGTTTTGAACCTTGCTGATAAAACAATGAACAATTGCTTGAGAAATGGATTCAGTGGACCAGAAGAACCAATAATTCATGTTCCGTATTCCGGTGAAGAAAAAGGGAACAATAACTCTGATAAATCATCTGTCACTTCAACAAAGCCATCGGAAGGTTCAACCATTGATAAGTCCCAAGAACAAGTTATGCAGAACTTTCCCGGTTTCCCACCTCAAGTTCCCTACATAACTGGTTCCCCTTGGCCTGTCCCGTGGAATCCGGCTCAATGGAGCTCTCCTGTACCACCACCTTCCTTTTTCCCACCAGGATTTGCGATGCCATTCTATCCGGCAGCTGCTTATTGGGGTTGTACAGTGCCGCCGGGTGCGTGGAATATGAACATCCCATGGCTAGCACAACCATCATCACCAAATAGTACAGCTACAGCCACTAACTCTGGTCCTAACTCCCCCACCTTGGGTAAACATTCAAGGGAGGAAAACATGGTAAAACCAAATGATGCTGCAGAATCGGATGAACATAGTAAAGGAGGAATTAATAAAGAAAAAAACCTTTGGGTTCCGAAAACGTTAAGGATTGATGATCTAGGAGAAGCAGCAAAAAGCTCTATATGGACAACTCTTGGGATTGAAAATGATAAGGCAGGCTCATTTTCTAGGAGAGGAATCTTTAAAGCTTTCCCATCAAAGCGTGATGAGAAAAATCGTGTAATGCAAAACTCGCCGGTCTTGCAGGCCAATCCAGCAGCATTGTCTAGGTCGATTAACTTTCATGAGTCCTCATAG 1497 0.4502 MSEAKDPAIKLFGKTIPVPEIPAGSGDSNKDPPLSSGDVFDQNHASSSNSSDRGEEELEIEQDTMGEKPTEDKMEDVTQSSEEVTNFDTASRSGEASVTPATEKEATTLETSRAEEEYGENSQEMTLKKPDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRKNKNSISHFRQITVPEAALQNPQSNGVHYPSLKSNGTVLTFGSDTPLCESMASVLNLADKTMNNCLRNGFSGPEEPIIHVPYSGEEKGNNNSDKSSVTSTKPSEGSTIDKSQEQVMQNFPGFPPQVPYITGSPWPVPWNPAQWSSPVPPPSFFPPGFAMPFYPAAAYWGCTVPPGAWNMNIPWLAQPSSPNSTATATNSGPNSPTLGKHSREENMVKPNDAAESDEHSKGGINKEKNLWVPKTLRIDDLGEAAKSSIWTTLGIENDKAGSFSRRGIFKAFPSKRDEKNRVMQNSPVLQANPAALSRSINFHESS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0098 498 MobiDBLite consensus disorder prediction 1 126 - -
Lan5g0098 498 MobiDBLite consensus disorder prediction 261 294 - -
Lan5g0098 498 ProSitePatterns Zinc finger Dof-type signature. 136 172 IPR003851 GO:0003677|GO:0006355
Lan5g0098 498 MobiDBLite consensus disorder prediction 372 395 - -
Lan5g0098 498 MobiDBLite consensus disorder prediction 63 79 - -
Lan5g0098 498 ProSiteProfiles Zinc finger Dof-type profile. 134 188 IPR003851 GO:0003677|GO:0006355
Lan5g0098 498 MobiDBLite consensus disorder prediction 269 294 - -
Lan5g0098 498 MobiDBLite consensus disorder prediction 372 393 - -
Lan5g0098 498 PANTHER CYCLIC DOF FACTOR 2 1 497 IPR045174 GO:0003700|GO:0006355
Lan5g0098 498 MobiDBLite consensus disorder prediction 29 49 - -
Lan5g0098 498 MobiDBLite consensus disorder prediction 80 107 - -
Lan5g0098 498 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 497 - -
Lan5g0098 498 Pfam Dof domain, zinc finger 131 188 IPR003851 GO:0003677|GO:0006355
Lan5g0098 498 MobiDBLite consensus disorder prediction 108 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0098 Lan-Chr5 1193668 1197651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0098 6 498 C2C2-Dof Transcription Factor Family AT5G39660 44.358 6.33e-109 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan5g0098 zf-Dof 9.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0098 - - aprc:113862693 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0098 5 1193668 1197651 Lan5g0098 5 1193668 1197651 ECH