Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1849 ATGCACTCTTCAAGAATGAAGCTTTTTTCCATGGATATCCAAAACCTTATACCCTTTATCCTTCTCTTTTTCATTCCATGCTCTTTTTGTTTCACTCCAATAGATAACTATCTTCTTAACTGTGGATCATACACCAATGCTTCACTCTTCAACCGAGTCTTTGTAGCTGATTCCACTTTTCTCTCTGCTGAAAAATCCATTTCACTCACTAACCAAAACCCACCTCCAAATTCTCCTACTTTGTACCATACAGCCAGAGTTTTCACCAACACTGCTGGTTACAGGTTCAGCATGAAGAAAAATGGTATCCAATTGGTGCGTTTTCATTTCTTTCACTTTAAAGCTCAAGGTTTTGATATGAAATCAGCAAAATTTGATATCTTGGTTAATGAAATTTTGGTTCTCAGTGGTTTCCAGTCAACTAGTGATGATGTGTTGGTTAAAGAGTTTATTTTGAAGATAGAGTCAAACTTGCTTGAAATTTTGTTTAGACCTGTTGGTAACTCAGGTTTTGGATTTGTAAATGCTGTGGAGGTGTTTAATGCTCCTCCAGATTTTGTATTAGATTATGGAACCAGGTTGGTTGGTCCTAATGGAGTGGAGGTCTATAACAAGCTCTCATCTCAGGTTTTGGAAACTATTCATAGGATTAATGTTGGAGGTTTGAAAATAACACCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAGGATTTTTTGGTTTTTAAGGATGCTGCTAAGGCTGCAGTAAGCACTCACACACCAGATTATCAGAAAGGAGGTGCCACACGAGAGATTGCGCCGGATAATGTTTACATGACTGCTCAACAGATGAATAGGGACAACTCAATTTTAGCTTCAAGGTTCAATATAACCTGGAATTTTACTGTGGCTCCTCCTGGTGGCCGTGTTCCACACTTGGTTCGATTGCATTTCTGTGACATTGTTAGTCCTGTTCTTAACTTGCTCTACTTTGATGTGTATATTAATGGGTATGTTGCATATAAGGATCTTGATTTGTCATCCCTTACTGTCCATACACTTGCCTCGCCAGTCTATGTGGATTTTGTTGCAGATTCAGATGATTCGGGTGTTATTCAAATAAATGTCGGTCCTTCTGATCTGAGCAGTGCATTGAGGATGAATGCCATATTGAATGGTGCGGAGATAATGAAGGTGGTGAATGTTATTGATTCTAGTATTGTGCACAGGAAGAAAAAATTGGGGGTGTTGGTGAGTTCAATTGTTGGAGGCTTTGTTGGCTTTGTAGTTATCATTGTTTTTGTACTTGCTATGAAATGCAGGAAGAAGAAACCAAAACTAAGGACAGTGGAAAGTGCTGGATGGACGCCTTTACGTATGTTTGGAGGGAGTTCTCTCAGTAGAATGTTGTCTGAAACTGGTTCTCATGGATATTCAGGCTTGAAGATCCCTTTTGCTGATATAGAATCCGCAACCAACAAGTTTGATAGAAGCCTGATTATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGGGTACTTAAAGACAATGTGAAGGTTGCCGTGAAGAGGGGTATGCCAGGGTCCAGACAAGGCCTTCCAGAATTCCAGACTGAAATAACAATTCTATCAAAAATTCGGCATCGCCACCTTGTTTCACTAGTCGGATTTTGTGAAGAGAATTCAGAAATGATACTTGTGTATGAGTATGTGGAAAAAGGTCCACTTAAAAGGCACTTATATGGTTCAGCAGCACTACCACCTCTCTCTTGGAAGCAGCGTCTCGAAATATGCATCGGTGCAGCTAGAGGTCTTCACTATCTTCACACAGGTTTTGCACAAGGTATCATCCACCGCGACATTAAATCTACCAATATATTGCTTGATGAAGATTATGTGGCCAAGGTTGCTGACTTTGGTCTTTCAAGATCAGGGCCATGCATGAATGAAACACATGTGAGCACTGGCGTGAAAGGTAGCTTTGGTTATCTTGATCCTGAGTATTACCGGAGGCAGCAACTTACGGATAAATCAGATGTTTATTCATTTGGTGTTGTGCTTTTTGAGGTTCTTTGTGGCAGACCTGCTGTTGATCCACAACTAACAAGGGAGCAAGTGAATTTGGCAGAATGGGCACTTGAATGGATGAAGAAGGGTATGCTGGAGCATATTGTTGACCCTCATCTAGTTGGACAAATCAAAGATAGATCACTCAAGAAATTTGGTGAAACAGCAGAGAAATGTGTGGCTGAATATGGTGTTGATAGGCCAACTATGGGTGATGTCTTATGGAATTTGGAATACGCGCTTCAGCTCCAAGAAAGTGGACAACAAAGGGAGCCACATACCGATAGCAGTACCAATGAAACAGTGAATGTGACAACCAGGGTTGTCCTTGGAAATTCTTCTAGCAACAGAAGAACTGAGAGAGATTATGATAATGGTTGTTCAGACATATGTGGTAGCCAAGTGTTTTCCCAGCTAATGACCAATGAAGGAAGATAG 2493 0.4063 MHSSRMKLFSMDIQNLIPFILLFFIPCSFCFTPIDNYLLNCGSYTNASLFNRVFVADSTFLSAEKSISLTNQNPPPNSPTLYHTARVFTNTAGYRFSMKKNGIQLVRFHFFHFKAQGFDMKSAKFDILVNEILVLSGFQSTSDDVLVKEFILKIESNLLEILFRPVGNSGFGFVNAVEVFNAPPDFVLDYGTRLVGPNGVEVYNKLSSQVLETIHRINVGGLKITPFNDTLWRTWIPDEDFLVFKDAAKAAVSTHTPDYQKGGATREIAPDNVYMTAQQMNRDNSILASRFNITWNFTVAPPGGRVPHLVRLHFCDIVSPVLNLLYFDVYINGYVAYKDLDLSSLTVHTLASPVYVDFVADSDDSGVIQINVGPSDLSSALRMNAILNGAEIMKVVNVIDSSIVHRKKKLGVLVSSIVGGFVGFVVIIVFVLAMKCRKKKPKLRTVESAGWTPLRMFGGSSLSRMLSETGSHGYSGLKIPFADIESATNKFDRSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKRHLYGSAALPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCMNETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWALEWMKKGMLEHIVDPHLVGQIKDRSLKKFGETAEKCVAEYGVDRPTMGDVLWNLEYALQLQESGQQREPHTDSSTNETVNVTTRVVLGNSSSNRRTERDYDNGCSDICGSQVFSQLMTNEGR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1849 830 PANTHER OS07G0166700 PROTEIN 24 774 IPR045272 GO:0004714|GO:0006468
Lan4g1849 830 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 774 - -
Lan4g1849 830 Gene3D - 210 397 - -
Lan4g1849 830 Gene3D - 36 183 - -
Lan4g1849 830 CDD STKc_IRAK 497 763 - -
Lan4g1849 830 Gene3D Phosphorylase Kinase; domain 1 461 566 - -
Lan4g1849 830 Gene3D Transferase(Phosphotransferase) domain 1 567 790 - -
Lan4g1849 830 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1849 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Lan4g1849 830 SMART serkin_6 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1849 830 Pfam Protein tyrosine and serine/threonine kinase 496 708 IPR001245 GO:0004672|GO:0006468
Lan4g1849 830 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Lan4g1849 830 SUPERFAMILY Protein kinase-like (PK-like) 477 762 IPR011009 -
Lan4g1849 830 Pfam Malectin-like domain 39 395 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1849 Lan-Chr4 26982123 26984975 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan4g1849 Malectin_like 5.8e-34 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0963 7 9448759 9458357 Lan4g1849 4 26982123 26984975 PCT
Lan13g0707 13 6776595 6779641 Lan4g1849 4 26982123 26984975 PCT
Lan4g1849 4 26982123 26984975 Lan7g0963 7 9448759 9458357 PCT
Lan4g1849 4 26982123 26984975 Lan13g0707 13 6776595 6779641 PCT