Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1255 ATGATGGAGTCAGAAGGGGAAGCTGGGGCGAAGCAGATGAAGGTATTGGGTGGCAAAGTCTGCCAGATCTGTGGTGATAATGTTGGGAATACTGTGGATGGTGAACCATTCATCGCGTGCGATGTTTGTGCTTTCCCAGTCTGCAGGCCGTGCTATGAGTATGAAAGGAAGGATGGGAATCAGTCCTGCCCCCAGTGCAAAACCCAGTACAAGAGGCACAAAGGCAGTCCTGCAATTCTCGGAGACAGGGAAGAGGATGGTGGTGCTTATGATGGTGCCAATGACTTCAATTACAATTCGGAAAATCAAAACCAAAAGCAGAAGATCGCAGAACGCATGTTGAGTTGGCAAATGGCGTATGGGCGAGCGGAGGATGTTGGTGCTCCAAATTATGATAAGGAAGTTTCTCACAACCATATTCCTCTGCTGACCAGTGGACAAGAGGTTTCAGGAGAATTATCTGCAGCTTCACCCGAGAGGCTGTCTATGGCATCTCCCGCAGCTGCTCGTGGGAAGCGTGTCCATAATCTTACATATTCATCGGATGCTAATCAATCACCAAATATTAGGGTTGTGGATCCAGGATTTGGCAATGTTGCATGGAAAGAAAGAGTTGATGGCTGGAAAATGAAACAAGATAAGAATGCTGTTCCGATGAGCACGGGGCAGGCTACTTCTGAAAGAGGAGTAGGAGATATTGATGCTAGTACCGATGTGCTTGGGGATGACTCCTTGTTGAATGATGAAGCTCGGCAACCTCTGTCTAGGAAGGTTTCTCTTCCATCATCTAGGATAAATCCATACCGAATGGTCATTGTTTTGCGGCTGGTTATCCTCTGCATTTTTTTGCACTACCGAATCACAAATCCTGTGCCCAATGCATATGCATTGTGGTTGATATCCGTTATATGTGAAATTTGGTTTGCCTTTTCATGGATATTGGATCAATTCCCTAAGTGGCTCCCTGTGAACCGTGAAACATATCTTGACCGGCTTGCACTAAGGTATGACCGAGAAGGGGAACCGTCACAGTTAGCAGCCGTTGACATCTTTGTCAGTACTGTTGATCCATTAAAGGAGCCCCCACTTGTGACTGCAAATACTGTACTTTCTATTCTAGCTGTTGACTACCCAGTGGATAAGGTCTCCTGCTATGTGTCTGATGATGGTGCCGCCATGTTAACATTTGAAGCACTGGCTGAAACATCAGAATTTGCACGGAAATGGGTTCCTTTCTGCAAGAAATATAGCATTGAGCCCCGAGCCCCTGAGTGGTATTTTGCACTGAAGATTGACTACTTGAAAGATAAAGTTCAACCATCATTTGTCAAAGAGCGTAGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGTATCAATGGACTTGTTTCAAAGGCAGTGAAGGTTCCCGAGGAAGGATGGGTGATGCAAGATGGTACACCATGGCCGGGAAACAACACTAGAGATCATCCAGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGACGGTAATGAACTTCCACGTTTAGTCTATGTTTCCCGTGAAAAACGTCCAGGGTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCACTTGTTCGAGTAGCGGCTGTCCTGACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCCAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTCGGCAAAAATGTTTGCTATGTCCAGTTTCCTCAGAGATTTGATGGTATTGATAGGAATGATCGATATGCCAACCGTAATACTGTTTTCTTTGATATAAATTTGAGAGGTTTGGATGGCATTCAAGGCCCTGTTTATGTGGGTACTGGATGTGTCTTTAATAGAACGGCTTTATATGGTTATGAACCTCCTATTAAACCCAAGCATAAAAAGATTGGAATGCTTTCTTCACTCTGTGGTGGGAGTCGAAAGAAGAGTTCAAAATCTGGCAAGAAAGGCTCAGACAAGAAAAAGTCTAGCAAGCATGCTGACCCAACTGTGCCGATCTTCAATCTCGAGGATATAGAAGAAGGAGTAGAAGGTTCCGGGTTTGATGATGAGAAAACACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCTGTTTTCGTTGCATCTACACTTATGGAAAATGGTGGTGTTCCTCAGTCTGCTACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGCGGTTATGAGGATAAAACAGAATGGGGAAGCGAGATAGGATGGATCTATGGTTCTGTCACAGAAGATATTCTTACCGGATTTAAGATGCATGCCCGTGGTTGGCGGTCTATATACTGCATGCCCAAGCTTGCAGCATTTAAAGGTTCTGCTCCTATCAATCTATCAGATCGGCTGAACCAAGTGCTTCGATGGGCTTTGGGTTCGGTTGAAATTCTTGTAAGTCGACATTGTCCCATCTGGTATGGTTATAGTGGAAGACTAAAGTGGCTGGAGAGGTTCGCATATATAAACACCACAATCTATCCGATCACTTCGATTCCCCTTCTCATGTATTGTACCTTACCTGCTGTATGTCTCCTGACTAACAAGTTCATTATTCCACAGATTAGTAACCTTGCCAGTATATGGTTTATCCTTCTCTTTCTTTCCATCTTCGCAACGGGTATCCTTGAGATGAGATGGAGTGGCGTTGGAATTGACGAGTGGTGGAGAAATGAACAATTTTGGGTTATCGGTGGTGTTTCAGCCCATCTTTTTGCTGTGTTCCAAGGTTTACTCAAAGTGCTTGCTGGAATTGACACCAACTTCACTGTTACCTCAAAGGCATCAGATGAAGATGGAGATTTTGCTGAACTCTACTTGTTTAAATGGTCAACCCTTCTCATTCCACCAACAACTCTTCTCATCATAAACTTGGTCGGAGTTGTTGCTGGTATCTCCTACGCTGTAAACAGCGGCTACCAATCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTGCCTTTTGGGTGATCATTCATCTCTACCCCTTCCTCAAAGGTCTCATGGGACGCCAGAATCGAACGCCAACCATCGTGGTGGTCTGGTCTATTCTGCTTGCATCCATTTTCTCACTGTTATGGGTCCGAATCGATCCGTTTACAACAAGAGTTACTGGTCCTGATGTGGAGCAATGTGGAATTAACTGCTAG 3231 0.4451 MMESEGEAGAKQMKVLGGKVCQICGDNVGNTVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTQYKRHKGSPAILGDREEDGGAYDGANDFNYNSENQNQKQKIAERMLSWQMAYGRAEDVGAPNYDKEVSHNHIPLLTSGQEVSGELSAASPERLSMASPAAARGKRVHNLTYSSDANQSPNIRVVDPGFGNVAWKERVDGWKMKQDKNAVPMSTGQATSERGVGDIDASTDVLGDDSLLNDEARQPLSRKVSLPSSRINPYRMVIVLRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAFSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYSIEPRAPEWYFALKIDYLKDKVQPSFVKERRAMKREYEEFKIRINGLVSKAVKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVAAVLTNGPFLLNLDCDHYINNSQALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKIGMLSSLCGGSRKKSSKSGKKGSDKKKSSKHADPTVPIFNLEDIEEGVEGSGFDDEKTLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLAAFKGSAPINLSDRLNQVLRWALGSVEILVSRHCPIWYGYSGRLKWLERFAYINTTIYPITSIPLLMYCTLPAVCLLTNKFIIPQISNLASIWFILLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWSTLLIPPTTLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1255 1076 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 95 IPR013083 -
Lan4g1255 1076 MobiDBLite consensus disorder prediction 655 681 - -
Lan4g1255 1076 SUPERFAMILY RING/U-box 6 89 - -
Lan4g1255 1076 Pfam Zinc-binding RING-finger 11 86 IPR027934 -
Lan4g1255 1076 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 1076 - -
Lan4g1255 1076 CDD mRING-HC-C4C4_CesA_plant 19 68 - -
Lan4g1255 1076 ProSiteProfiles Zinc finger RING-type profile. 21 67 IPR001841 -
Lan4g1255 1076 PANTHER CELLULOSE SYNTHASE 3 1076 - -
Lan4g1255 1076 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 500 639 IPR029044 -
Lan4g1255 1076 SUPERFAMILY Nucleotide-diphospho-sugar transferases 362 898 IPR029044 -
Lan4g1255 1076 Pfam Cellulose synthase 348 1069 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1255 Lan-Chr4 20940223 20947992 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0711 13 6859697 6867684 Lan4g1255 4 20940223 20947992 PCT