Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0694 ATGGGCTTGAGTTCTAAGCAAGTTTCTAATAGAGGAATTGATTGGAATCAAACCTTGTTGGAAGCACAAAACTTAGAACTACCACAGCCTCATAATTCAATGAGGAAACAACATGAACAAAATCAGCAACTAGAGCTTGTGAAATGCCCAAGATGTGATTCAACAAACACCAAGTTTTGTTACTACAACAACTATAACAAGTCTCAGCCGCGCCATTTCTGTAGATCTTGTAAGAGGCACTGGACTAAAGGTGGAATTCTAAGAAATGTTCCTGTTGGTGGTGGTGGCAGAAAGAACAAGATAGAAAAAAAATCAACCTCAACCTCAACTTCAGCTACAAACACCACTTCAATTATCACAACAAGTGTTCCTTCTCTTGAAGTGGATCATGATCATGATCATGATCATGATCACAAAACCATGCCTTCCACTCTTTACCAATCTTTGATTTGTCCAACTACAAGGGAATCAGAAGTTAAAGACTTTGGTATAGGTAATGGAATATTTCTGAGTTCAACTATGCCTCTTACACAAAACCAAGGCATGATCTTTCCTTTCTCAACTACCTCAAGCTCTTTTGACACAAACCCATGTTCTGTATCAACATCTTTGCATTCCTCCAATGTTTATAACTATGGAGAAGAATTTAAAACAATGGAGGAATCAACCATCAATAGCATGATGCCTATTACTAGTGGTACTAACACACAACAATGGGAGATACCTACAACAAGTACTAGCATGGGAATGTCAAACTATTGGAGTTGGGAGGATATTGATTCATTGGTATCAACTGATCCAAATGTTCCTTGGGATGATGATTATGATGTCAAACCCTGA 840 0.3798 MGLSSKQVSNRGIDWNQTLLEAQNLELPQPHNSMRKQHEQNQQLELVKCPRCDSTNTKFCYYNNYNKSQPRHFCRSCKRHWTKGGILRNVPVGGGGRKNKIEKKSTSTSTSATNTTSIITTSVPSLEVDHDHDHDHDHKTMPSTLYQSLICPTTRESEVKDFGIGNGIFLSSTMPLTQNQGMIFPFSTTSSSFDTNPCSVSTSLHSSNVYNYGEEFKTMEESTINSMMPITSGTNTQQWEIPTTSTSMGMSNYWSWEDIDSLVSTDPNVPWDDDYDVKP* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0694 279 MobiDBLite consensus disorder prediction 105 124 - -
Lan4g0694 279 MobiDBLite consensus disorder prediction 90 139 - -
Lan4g0694 279 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Lan4g0694 279 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 32 229 IPR045174 GO:0003700|GO:0006355
Lan4g0694 279 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Lan4g0694 279 PANTHER OS06G0284500 PROTEIN 32 229 - -
Lan4g0694 279 Pfam Dof domain, zinc finger 46 100 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0694 Lan-Chr4 9369112 9370959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0694 47 103 C2C2-Dof Transcription Factor Family AT3G21270 78.947 8.33e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan4g0694 zf-Dof 8.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0694 - - gmx:778119 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0694 4 9369112 9370959 Lan16g0124 16 985331 987058 LSH
Lan17g0694 17 6121971 6123235 Lan4g0694 4 9369112 9370959 PCT
Lan6g0713 6 6326058 6327339 Lan4g0694 4 9369112 9370959 PCT
Lan4g0694 4 9369112 9370959 Lan17g0694 17 6121971 6123235 PCT
Lan4g0694 4 9369112 9370959 Lan6g0713 6 6326058 6327339 PCT