Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1265 ATGGCTGGGTTATTCTCTTTAGGTCAACAAAACAAAGAAGAAGAAGAAGAAAATAATAACAACAGAAATAGTTTATTCTTGTTCAGGGACGAAAACGAAGAGATCTACAACAAAGGGTTCGAGATATGGCCACAATCTTATCATCACCACTACTCATCATTTGGGGTGGGTCCTAGTAGCAGGAACTCAAACGTTAATAACATTGTTGGTGACGAACACGTTTCACTCTCTGATGAGTCAACGAGATTTGGACTAATGGTAATGAAATCAAGTGGCAGTAGCAGCAGCGGAATGAACTGTCAGGACTGTGGGAATCAAGCTAAGAAAGACTGTGTACATCTGAGATGCAGAACTTGTTGTAAGAGTCGAGGGTTTCAGTGCCAAACTCATGTTAAGAGTACTTGGGTCCCCGCTGCTAAACGCCGTGAACGACAACAACAATTGCTCAGAGACACCGCTTCTAAACGACATCGAGAGCATCAAGGTTTACATTCTCCACCACCTGTCACAACCATGGGGTTAGAGCTGGGAGTACAATTTCCACCTGAAGTGAACTCAACAGCGGTGTTTAGATGTGTAAAAGTGACAGCAGTGGACACTCCAGAAGAACAATATGCGTATCAAGCATCTATCAACATAGGTGGACATGTTTTCAAAGGAGTTCTCTATGATCAAGGACCTGAAGGTTCTTACACCAATATTGAAGGTTCATCTGGTGGTGGTGGAGAAGGAGGTGAAGCTACTCAACAACAACTTGGTCTCATAACTTCAGCAACCACAGTCACAACCACTGGGAACCTATTTGACCCTTCTTCACTTTACCCTCCTCCACTCATGAATGCTTTCATGGCTGGTACGCAATTTTTCCTACCCCCAAGATCCTAA 885 0.435 MAGLFSLGQQNKEEEEENNNNRNSLFLFRDENEEIYNKGFEIWPQSYHHHYSSFGVGPSSRNSNVNNIVGDEHVSLSDESTRFGLMVMKSSGSSSSGMNCQDCGNQAKKDCVHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLLRDTASKRHREHQGLHSPPPVTTMGLELGVQFPPEVNSTAVFRCVKVTAVDTPEEQYAYQASINIGGHVFKGVLYDQGPEGSYTNIEGSSGGGGEGGEATQQQLGLITSATTVTTTGNLFDPSSLYPPPLMNAFMAGTQFFLPPRS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1265 294 MobiDBLite consensus disorder prediction 1 24 - -
Lan3g1265 294 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 99 141 IPR006510 -
Lan3g1265 294 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 179 227 IPR006511 -
Lan3g1265 294 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 291 IPR007818 GO:0003700|GO:0006355
Lan3g1265 294 Pfam Domain of unknown function (DUF702) 97 228 - -
Lan3g1265 294 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1265 Lan-Chr3 24721907 24724303 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lan3g1265 DUF702 1.9e-54 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0938 14 15800717 15802848 Lan3g1265 3 24721907 24724303 LSH
Lan10g0544 10 4459593 4461785 Lan3g1265 3 24721907 24724303 PCT
Lan3g0458 3 4158103 4160110 Lan3g1265 3 24721907 24724303 PCT
Lan3g1265 3 24721907 24724303 Lan10g0544 10 4459593 4461785 PCT
Lan3g1265 3 24721907 24724303 Lan3g0458 3 4158103 4160110 PCT