Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1261 ATGGACCTCGATCCTCATCAATACGAAAACATTGCTGTAAATGATAATGACATCCACAACGTTGTTCTGTCATATCTTATACATAACTGCTACAATGAATCAGTAGAGTCATTCATTGCTTGCACTGGGATGAAGCAGCAAACAGATTATTTGGAGAACATGGAGAAAAGAAAAAGAATCTTTCAGTGTGCATTGGAGAGAAATGCACTTATGGCTATTGAGCTTGCTGAACAGCTGGGACCGGATATTCTAAAGAACAATGAGGATTTGGAGTTTGATCTTCTGAGCCTTCATTTTGTTGATCTTGTCTGCTCTAAGAAATGCACAGAAGCGTTGGAATTTGCACAGATAAAGTTGAGCCCTTTTGGAAAGGAGCAAAAGTATAGGGAAAAGCTTGAAGACTTTATGGCCCTTCTTGCTTATAATGAACCAGAGAAATCCCCAGTGTTTCATCTGCTTAGCTTAGAGTACCGGCAACAGGTTGCAGATAGTTTGAATCGAGCTATTCTTGCACACTTGAATCTTCCCAGCTACACGGCAATGGAAAGGCTAATACAGCAGGCTACAGTCGTCAGACAATGCTTGACTCAGGAAACTGTCAAGGTATACGCAATCCACCAGTTACCTTGGCTAAGGTTGTTATTGGTTGGTACCAAGATAATTATTTCTGTCTGGGGCAGTGCAGTTGATTTAATATGTGCTCTGATGTCTCTTGACATAACCTATTTAAGATTATATTCAATCCATTGTGAGGTTGAGCAGACAAAACCAAGCATATGTATTTTCATGTCCTGA 795 0.4013 MDLDPHQYENIAVNDNDIHNVVLSYLIHNCYNESVESFIACTGMKQQTDYLENMEKRKRIFQCALERNALMAIELAEQLGPDILKNNEDLEFDLLSLHFVDLVCSKKCTEALEFAQIKLSPFGKEQKYREKLEDFMALLAYNEPEKSPVFHLLSLEYRQQVADSLNRAILAHLNLPSYTAMERLIQQATVVRQCLTQETVKVYAIHQLPWLRLLLVGTKIIISVWGSAVDLICALMSLDITYLRLYSIHCEVEQTKPSICIFMS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1261 264 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Lan3g1261 264 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 202 - -
Lan3g1261 264 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Lan3g1261 264 PANTHER RAN BINDING PROTEIN 9-RELATED 8 202 - -
Lan3g1261 264 SMART toby_final6 106 201 IPR013144 -
Lan3g1261 264 SMART ctlh 53 110 IPR006595 -
Lan3g1261 264 Pfam CTLH/CRA C-terminal to LisH motif domain 54 191 IPR024964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1261 Lan-Chr3 24689716 24693251 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0935 14 15776980 15780018 Lan3g1261 3 24689716 24693251 LSH
Lan3g1261 3 24689716 24693251 Lan14g0935 14 15776980 15780018 PCT
Lan3g1261 3 24689716 24693251 Lan3g1261 3 24689716 24693251 PCT
Lan14g0935 14 15776980 15780018 Lan3g1261 3 24689716 24693251 PCT