Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1259 ATGGCATTCCTTCAGATTATCCCTTCAGCTTCAGCTTCAGCTTCTCCATCTTCTTCTCTACCTCACAACACATTCTCATTTTCACTCAACCCTAAATTCCAATACTCAACACGTCTTAACATTTTCCAACGCCGCCGTACCAATTCAAAATCCCTCCTCCTCCGCTGCTCCGCCTCCTCCTTCTCCGAGAAGCACCACACAAACTCTCCAAAATCCGACGACGTCGTCGAGCTCCCTCTCTTCCCTCTCCCCTTAGTTCTCTTCCCTGGCGCTATCCTCCCTCTACAGATCTTCGAGTTTCGCTACCGTATCATGATGCATACTCTCCTCCACACCGACCTCCGCTTCGGCGTAATCTACTCCGACGCCGTTTCCGGCACCGCCGACGTAGGTTGCGTCGGAGAAGTCATAAAACACGAGCGCCTCGTCGACGACCGGTTCTTCCTAATCTGCAAAGGTCAGGAACGGTTCCGCGTTAATAAATTGGTCCGAACCAAACCCTATCTCGTGGCTCAGGTGACGTGGCTGGAGGATAGGCCTTCGGCTTCGGAGGACACGGACCTTGACGGTTTGGCCGATGATGTTGAGACATACATGAAAGACGTGATTCGGTTATCGAACCGTTTGGGAGGGAAACCAGAGAAGGAGGTTGGAGATTTGAGGAGGAACCTGTTTCCGACGCCGTTTTCGTTCTTCGTTGGGAGCACTTTTGAAGGTGCACCGAGAGAGCAACAAGCTTTGCTTGAATTGGAGGATACTGCTGCGAGATTGACGAGGGAGAAAGAAACGTTGAGGAATACGCTTAATTATCTCACTGCTGCTTCTGCTGTCAAAGATGTTTTCCCTTCTTCATCTTCTTGA 861 0.5075 MAFLQIIPSASASASPSSSLPHNTFSFSLNPKFQYSTRLNIFQRRRTNSKSLLLRCSASSFSEKHHTNSPKSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYSDAVSGTADVGCVGEVIKHERLVDDRFFLICKGQERFRVNKLVRTKPYLVAQVTWLEDRPSASEDTDLDGLADDVETYMKDVIRLSNRLGGKPEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLTREKETLRNTLNYLTAASAVKDVFPSSSS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1259 286 SMART lon_5 77 266 IPR003111 -
Lan3g1259 286 Gene3D - 59 176 IPR046336 -
Lan3g1259 286 ProSiteProfiles Lon N-terminal domain profile. 78 266 IPR003111 -
Lan3g1259 286 SUPERFAMILY PUA domain-like 77 265 IPR015947 -
Lan3g1259 286 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 10 284 - -
Lan3g1259 286 Coils Coil 240 274 - -
Lan3g1259 286 Pfam ATP-dependent protease La (LON) substrate-binding domain 77 264 IPR003111 -
Lan3g1259 286 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 10 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1259 Lan-Chr3 24682547 24683629 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1196 15 20459964 20460973 Lan3g1259 3 24682547 24683629 LSH
Lan3g1259 3 24682547 24683629 Lan15g1196 15 20459964 20460973 PCT
Lan3g1259 3 24682547 24683629 Lan3g1259 3 24682547 24683629 PCT
Lan15g1196 15 20459964 20460973 Lan3g1259 3 24682547 24683629 PCT