Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1258 ATGGAAGCCAATTCAGTTTCGAAGCTGCTAAGGTTGTTGTTTTTCACACTCTTTGTTATGGGTTCTGAGCTGATCCATTGCAATGTTACATATGATAGAAAGTCCCTTCTAATCAATGGCCAAAGGAGAATCCTCATATCTGGCTCCATTCATTATCCTAGAAGCACCCCTGAAATGTGGGAGGATCTAATTCAGAAAGCCAAACATGGAGGCCTTGATGTTATTGACACTTATGTCTTCTGGAATGTTCATGAACCTTCTCCTGGCAATTACAATTTTGAAGGAAGATATAATCTGGTACGGTTCATTAAGACAGTGCAAAAAGTGGGACTTTATGTTAATCTTCGCATTGGACCTTATATATGCGGTGAATGGAACTTTGGAGGATTTCCTGTTTGGTTGAAATATGTTCCTGACATCAGCTTCAGAACGGATAACGGGCCATTCAAGGCGGCGATGCAAGGTTTTACCCAGAAAATTGTTCAAATGATGAAGAGTGAAAAGTTGTTTCAATCTCAGGGTGGACCAATCATTCTTTCTCAGATTGAGAATGAGTTCGGACCGGAGAGTAAGGCAGGCGGAACTGCTGGTCAGGCATATCTAACATGGGCTGCAAGTATGGCTGTTGGGTTGGGTACAGGAGTCCCTTGGGTGATGTGCAAGGAAAATGATGCACCAGATCCTGTGATAAATACATGCAATGGTTTTTATTGTGATAATTTCTCTCCAAATAAACCATACAAGCCTAGCATGTGGACTGAGTCTTGGAGTGGCTGGTTTACAGAATTTGGTGGCCCGGTTCACCAGCGACCAGTTCAGGATCTAGCATTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCATTTGTGAATTATTACATGTACCATGGAGGAACTAACTTTGGACGATCAGCCGGAGGCCCATTCATTACTACAAGCTATGACTATGATGCGCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATATAGTCATTTGAAGGATCTTCATATAGCTATCAAGCACAGTGAGCATGCTTTGGTTTCTGCAGATCCTACTGTCACATCATTAGGAACCTATCAGGAGGCTCATGTATACTCTTCAAGGAGTGGAGCATGTGCAGCATTTCTAGCAAACTATCATGCACAATCTGCTGCTACAGTTAATTTCAATAACAGGCAATATGATTTACCGCCTTGGTCGATAAGCATTCTCCCTGATTGCAGAACAGTTGTATTTAATACTGCAAAAGTGAGAGTTCAAGCTTCACAGATAAAAATGCTGCCTACCAATTCCAAGTTATTCTCATGGACAACCTATGATGAAGATTTATCTTATTTGGCCGAAAGTTCAAGGATTACAGCTACTGGACTCTTGGAACAGATGAACATTACCAGAGACACTAGTGACTATTTATGGTACATAACCAGTGTTGACATAAGTTCATCAGAATCATTTCTTAGAGGAGGACACAGACCCAGCATTACTGTTTTTTCTGCAGGACATGCCGTCCACGTGTTTGTTAATGGAGAATTTTCAGGGTCTGCTTTTGGGTCAAAGAAACAGAAAAATTGCACATTTAATGGACCCGTCAACCTACGAGCTGGAACAAATAGAATTGCACTTCTTAGCATGACTATTGGATTACCAAATGCTGGCAGGCATTACGAAACATTGAAGACAGGTATCACGGGTCCGGTTTTGCTCCATGGTCTAGATCATGGACAGAAAGATTTGACGTGGAATAAATGGTCATACCAGGTTGGCCTAAAAGGAGAGAATATGAACTTCGCATATCCCAATGTGGTCTCATCTGTTGGTTGGTTCCTAGACTCGCTACCTATCAGACGCCGCTCGCAATTGAAATGGCACAAGACATATTTCGACGCGCCCGGGGGAACGGAGCCATTGGCTTTAGACCTAGGAAGCATGGGAAAAGGTCAAGTATGGATCAATGGGCAAAGCATAGGAAGATATTGGATGGCTTATGCAAAGGGTGACTGTAATTCTTGCATGTACTCGGGGCCATTCCGGCCTACGAAATGCCACCTTGGTTGCGGACAACCCACCCAACGATGGTATCACGTTCCAAGGTCATGGCTAAAACCAACAAGGAACTTGATAGTAGTTTTTGAAGAACTAGGTGGAGATCCTTGGAAAATATCTCTAGTAAAGAGAGTGGTACATACTCCAAAAAGCTAG 2205 0.4263 MEANSVSKLLRLLFFTLFVMGSELIHCNVTYDRKSLLINGQRRILISGSIHYPRSTPEMWEDLIQKAKHGGLDVIDTYVFWNVHEPSPGNYNFEGRYNLVRFIKTVQKVGLYVNLRIGPYICGEWNFGGFPVWLKYVPDISFRTDNGPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEFGPESKAGGTAGQAYLTWAASMAVGLGTGVPWVMCKENDAPDPVINTCNGFYCDNFSPNKPYKPSMWTESWSGWFTEFGGPVHQRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKDLHIAIKHSEHALVSADPTVTSLGTYQEAHVYSSRSGACAAFLANYHAQSAATVNFNNRQYDLPPWSISILPDCRTVVFNTAKVRVQASQIKMLPTNSKLFSWTTYDEDLSYLAESSRITATGLLEQMNITRDTSDYLWYITSVDISSSESFLRGGHRPSITVFSAGHAVHVFVNGEFSGSAFGSKKQKNCTFNGPVNLRAGTNRIALLSMTIGLPNAGRHYETLKTGITGPVLLHGLDHGQKDLTWNKWSYQVGLKGENMNFAYPNVVSSVGWFLDSLPIRRRSQLKWHKTYFDAPGGTEPLALDLGSMGKGQVWINGQSIGRYWMAYAKGDCNSCMYSGPFRPTKCHLGCGQPTQRWYHVPRSWLKPTRNLIVVFEELGGDPWKISLVKRVVHTPKS* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1258 734 SUPERFAMILY Galactose-binding domain-like 403 574 IPR008979 -
Lan3g1258 734 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
Lan3g1258 734 Gene3D - 443 587 - -
Lan3g1258 734 Gene3D - 612 732 - -
Lan3g1258 734 SUPERFAMILY (Trans)glycosidases 28 343 IPR017853 -
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 PANTHER BETA-GALACTOSIDASE 3 732 - -
Lan3g1258 734 Gene3D Glycosidases 25 345 - -
Lan3g1258 734 SUPERFAMILY Galactose-binding domain-like 582 727 IPR008979 -
Lan3g1258 734 PANTHER BETA-GALACTOSIDASE RELATED 3 732 IPR001944 GO:0004553|GO:0005975
Lan3g1258 734 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Lan3g1258 734 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1258 Lan-Chr3 24675537 24681262 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0550 10 4544833 4550389 Lan3g1258 3 24675537 24681262 PCT
Lan3g0462 3 4195539 4201458 Lan3g1258 3 24675537 24681262 PCT
Lan3g1258 3 24675537 24681262 Lan10g0550 10 4544833 4550389 PCT
Lan3g1258 3 24675537 24681262 Lan3g0462 3 4195539 4201458 PCT