Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1253 ATGGCATCATGTAGTGGAAACTCATCCACATGCACAAAATTTCAGAGTTCTAGTTCTGAAGAAGATTTGCAGGTTGTGATGGATCAAAGAAAAAATAAGAGAAAGTTATCAAATAGAGAATCAGCAAGAAGGTGTAGGATGAGAAAGCAGAATCATATAGATGATATGATGAATCAGGTTTCTCAGCTCACAAAGGAGAACAGTGAAATTGTTACAAGTGTTAACTTCACCATGCAGCACTATCTGAATATTGAAGCAGAAAATTCTATTTTGAGGGTTCAGATGGTTGAACTTAACCAAAGGCTTGAATCACTGAATAGTATCATCAACCTCATAAACAGCACAACAAAAGATTGTTATGTAACAAGTGCTGAGAATTTCATGAATCCCATGAACATGTTCTATTTTAATCAACCCATTATGGCTTCTATGGACATGTTTCAGTGGTGA 450 0.3556 MASCSGNSSTCTKFQSSSSEEDLQVVMDQRKNKRKLSNRESARRCRMRKQNHIDDMMNQVSQLTKENSEIVTSVNFTMQHYLNIEAENSILRVQMVELNQRLESLNSIINLINSTTKDCYVTSAENFMNPMNMFYFNQPIMASMDMFQW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1253 149 MobiDBLite consensus disorder prediction 22 43 - -
Lan3g1253 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 148 - -
Lan3g1253 149 PANTHER BZIP TRANSCRIPTION FACTOR 1 148 - -
Lan3g1253 149 SUPERFAMILY Leucine zipper domain 30 84 IPR046347 GO:0003700|GO:0006355
Lan3g1253 149 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Lan3g1253 149 Pfam bZIP transcription factor 30 74 IPR004827 GO:0003700|GO:0006355
Lan3g1253 149 Gene3D - 28 83 - -
Lan3g1253 149 Coils Coil 46 66 - -
Lan3g1253 149 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Lan3g1253 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Lan3g1253 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1253 Lan-Chr3 24638970 24639798 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan3g1253 bZIP_1 2.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0557 10 4607845 4609024 Lan3g1253 3 24638970 24639798 LSH
Lan14g0931 14 15760458 15761561 Lan3g1253 3 24638970 24639798 LSH