Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1250 ATGACTTCAGACGGAGCAACGTCGGCGATGGCAGCGTCGAATCGGAGGAAACCGTCGTGGAGGGAGAGGGAAAACAATAGGAGGAGAGAGAGGAGGAGAAGAGCGATAGCGGCGAAGATATACTCAGGGCTAAGAGCTCAGGGGAACTATAATTTGCCAAAGCACTGTGATAACAATGAAGTTTTGAAAGCTCTTTGTAATGAAGCTGGTTGGACCGTTGAACCAGACGGCACTACCTATCGCAAGGGAAGTAGGCCCCCATCAGGTTCAGGTGCAGGGACCTCAACCAGAAACACCCCATTCTCCTCACAGAATCCAAGTCCTCTTTCATCCTCATTTCCAAGCCCAATTCATTCCTACCAACTTAGCCCTTCCTCCTCTTTTTTCCAAAGCCCCTCTCATTTGGATCTCAACAATGCTGACTTTCCATACATTCATAATGTTTTCCCACCATCTCTGGCTCCTTTAAGAATATCAAACAGTGCCCCTGTAACACCACCTGTGTCATCACCAACATCAACAAATCCTAAACCGATTCCTACTTGGGACTCATTTGCCAAAGCAGCTTCCTTCAATCTCAATCACAATCACAATCATCACCCTTTTTTTGCAGTTTCTGCCCCTGCTAGCCCAACACACCGTCACCTTTATACCCCGCCAACTATACCGGAGTGTGACGAGTCTGATACTTCCACCATTGAGTCTGGTCACTGGTTGAACTTCCGGCAAACATTTGCACCTTCTGCTGCATCTCCGCACCCATTTTGTCCAAGTCTCAGTTTTAGTATAAAACCTCCGCTTCAGCAGCAGCATGCTCTGCCTGATAACAGAGGGAAAATGCAAGCAATGACAATTTCTGAGGCAGAATTTGGGGAACAGGTGAAACCTTGGGTTGGGGAAAAGATTCATGAAGTGGGATTGGATGATCTGGAGCTGACACTTGGTAGTGGCAAGAATTAG 960 0.474 MTSDGATSAMAASNRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGSRPPSGSGAGTSTRNTPFSSQNPSPLSSSFPSPIHSYQLSPSSSFFQSPSHLDLNNADFPYIHNVFPPSLAPLRISNSAPVTPPVSSPTSTNPKPIPTWDSFAKAASFNLNHNHNHHPFFAVSAPASPTHRHLYTPPTIPECDESDTSTIESGHWLNFRQTFAPSAASPHPFCPSLSFSIKPPLQQQHALPDNRGKMQAMTISEAEFGEQVKPWVGEKIHEVGLDDLELTLGSGKN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1250 319 MobiDBLite consensus disorder prediction 16 31 - -
Lan3g1250 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 14 137 IPR008540 -
Lan3g1250 319 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 319 - -
Lan3g1250 319 MobiDBLite consensus disorder prediction 1 33 - -
Lan3g1250 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 319 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lan3g1250 319 MobiDBLite consensus disorder prediction 83 116 - -
Lan3g1250 319 MobiDBLite consensus disorder prediction 73 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1250 Lan-Chr3 24584275 24586634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1250 1 318 BZR Transcription Factor Family AT1G75080 61.919 8.04e-106 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lan3g1250 BES1_N 1.7e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1250 K14503 - gmx:100781888 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0587 10 4986005 4988489 Lan3g1250 3 24584275 24586634 LSH