Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1233 ATGAATCATCCTAACAAACAATTCTCTAACTCACCGTCATCACACAGTGACGGTAGTTTGAGACAATCACTTCAGCAACGTAGGCTTACTAAGCAAAAGAGGCTCCGTTACTTGACGGACCAAGACGCCGGCGTCAATTCCACGTCATCCTTGCCGGCTTCTCCTCTTCCATGTTTCAATATTGGTTCTTGTTCCGATCACTGGTCCTCCTCTGCAGTTCCTCAACCGTTACCTCTCCCTGAAACACCGTTGACTCACCGATCAGAGTCAACCATTCTATATTCTGCTAGTTATTATGCTCACCTTGGATCTCCTTCATTTGAGAATAGAGCCTTTCCCTTTTTCAGAAAGTCGATGGATCATGATACAGTGAGAAATTTTCGATCTTCAACCAATTTGGGTAGTGCATCCTCTTCTGATGCAATGACTATGAATGCAAAACATGACTTGAAAGTCAAAATTCCAGCTACAAGAGTCTTGGGAGGCCATAGTTCATGTAAAGATCCTAGACAACTATCTCATGAAACTATTTCCAACATGAAATTGCATTCTGCTACTAAGAGTGCTCCAACTAGCATACTCTCTAGTCCTGTTACTAGTCCTCGTAGAACAAGCAATGTAGATTTATTTGATCCTTCCCTTCATTTTCATCAACATTTCAATGACATTTTGAAAGTATCACTGGCTAAAACTGTTCCTAGTCCAGAATATTCTCCTCACCTTAGCCCGGGTAGCCGCAGTCATTTTCTCAATCCTAACACTGAAGAGGGGTCTAAGCAGCATAAATTTTGCTCCAGAGTATGGCCTGAAAATAATCATGTTTATGCTCACCCATTACCCCTTCCTCCCAAAGATTCATTACCATCACAAATTTGTACACAGCATCAATCAAGTATCATGCATCACACTACTGAAAATTCACCTTCATTGAAAGGTCCCTGGCAGAAGGGAAAACTTATCGGACGCGGATCATTTGGAAGTGTTTATCATGGAACCAACCTAGAGACTGGAGCCTCATGTGCTATGAAAGAGGTGGATCTTATTCCTGATGATCCTAAATCTGCTGACTGCATAAAGCAACTAGAGCAGGAAATCAGAATTCTTCGTCAACTAAAACACCCTAACATTGTGCAGTATTATGGCAGTGAAATAGTTGGGGATCACTTGTACATATACATGGAGTACGTTTATCCTGGATCAATTAACAAATTTATGCATGATCACTGCAGAGCTATGACCGAACCTATGGTTCGCAATTTTACATGGCATATTCTCTCTGGATTGGCATACTTACATAGTAAGAAGACTATCCATAGGGATATCAAAGGTCCAAACTTGCTGGTTAATGCATCGGGCACTGTCAAGCTCGCAGATTTTGGTGTGGCAAAAATTCTGACCGGGAAATCATATCAACTTTCATTGAAGGGAAGTCCCTACTGGATGGCTCCAGAGCTTATGATGGCTGCCATAAAGAAAGAATCCAGTCCAAAGCTTGCAATGGCTGTAGATATATGGAGCTTAGGGTGCACCATCATTGAGATGCTGACAGGAAAACCTCCATGGAGCGAGTTCGAAGAGGCTCAAGCCATGTTCAAAGTACTGCATAAGTCACCAACTATACCCGAAACTTTATCTTCAGAGGGACAAGATTTCCTTCTGCAGTGTTTCAGAAGGAATCCTGCAGATCGACCATCCGCGGCAATGCTTCTTACGCACACCTTTGTACAAAATTTGCATGACCAAGCAGGATCAGGTGATAACTGTCATAGCCCCGAATGCAGTCCCGAGGGTCGCGACATAGTGCCATTGTCAGCCTCCATACGCACACGGATCATTAACAAAATTCATAATTTAATAGGTGATACTTCCAAAAATCTGCCATGA 1884 0.4252 MNHPNKQFSNSPSSHSDGSLRQSLQQRRLTKQKRLRYLTDQDAGVNSTSSLPASPLPCFNIGSCSDHWSSSAVPQPLPLPETPLTHRSESTILYSASYYAHLGSPSFENRAFPFFRKSMDHDTVRNFRSSTNLGSASSSDAMTMNAKHDLKVKIPATRVLGGHSSCKDPRQLSHETISNMKLHSATKSAPTSILSSPVTSPRRTSNVDLFDPSLHFHQHFNDILKVSLAKTVPSPEYSPHLSPGSRSHFLNPNTEEGSKQHKFCSRVWPENNHVYAHPLPLPPKDSLPSQICTQHQSSIMHHTTENSPSLKGPWQKGKLIGRGSFGSVYHGTNLETGASCAMKEVDLIPDDPKSADCIKQLEQEIRILRQLKHPNIVQYYGSEIVGDHLYIYMEYVYPGSINKFMHDHCRAMTEPMVRNFTWHILSGLAYLHSKKTIHRDIKGPNLLVNASGTVKLADFGVAKILTGKSYQLSLKGSPYWMAPELMMAAIKKESSPKLAMAVDIWSLGCTIIEMLTGKPPWSEFEEAQAMFKVLHKSPTIPETLSSEGQDFLLQCFRRNPADRPSAAMLLTHTFVQNLHDQAGSGDNCHSPECSPEGRDIVPLSASIRTRIINKIHNLIGDTSKNLP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1233 627 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 9 587 - -
Lan3g1233 627 Gene3D Transferase(Phosphotransferase) domain 1 313 594 - -
Lan3g1233 627 MobiDBLite consensus disorder prediction 1 32 - -
Lan3g1233 627 MobiDBLite consensus disorder prediction 238 257 - -
Lan3g1233 627 ProSiteProfiles Protein kinase domain profile. 314 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1233 627 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 9 587 - -
Lan3g1233 627 MobiDBLite consensus disorder prediction 184 203 - -
Lan3g1233 627 MobiDBLite consensus disorder prediction 1 26 - -
Lan3g1233 627 SUPERFAMILY Protein kinase-like (PK-like) 291 581 IPR011009 -
Lan3g1233 627 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524
Lan3g1233 627 SMART serkin_6 314 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1233 627 Pfam Protein kinase domain 315 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1233 627 MobiDBLite consensus disorder prediction 234 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1233 Lan-Chr3 24494124 24498940 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan3g1233 Pkinase 2.6e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1168 15 20308618 20313252 Lan3g1233 3 24494124 24498940 LSH
Lan3g1233 3 24494124 24498940 Lan15g1168 15 20308618 20313252 PCT
Lan3g1233 3 24494124 24498940 Lan3g1233 3 24494124 24498940 PCT
Lan15g1168 15 20308618 20313252 Lan3g1233 3 24494124 24498940 PCT