Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1215 ATGGCTCTTCCCGAACACCACTTCCAACGACACCATCAACCACAACCATCAAATTCTTTGAGACATATACATTCAATTGATTTTGACGATCAGATGCCGCAGCCTCTCTCATATTTCAACCCCAATGATTTCCACCATCATCCTTTTCATGTTGTTGGGCTTGCTCCATCTGATGGCAGTGATGGTGGTGCTGATTTGAAATGGAATTATGGTGTGGAGCCTGAGAGAAAAAGACTGATAGAACAGGATTTTCTGGAGAACAATTCTCAGATATCTTGTGTTGATTTTATGCAACCTCAATCTGTATCCACTGGATTGGGTTTGTCACTCGACAATACCCGCAAGTCTTCTGCTGGAGACTCGGCTTTGTTGTCGCTTCTTGGCAGCAGTATTGATCGTGAGTTACTGCAGCAGGATGCGGAGATTGATAGATTTCTCAGAGTCCAGGGTGAACAATTGAGGAAAACAATTATGGAGAAGGTTCAGACAACACAACTTCAGAGCATTTCAATCATTGAAGACAGAGTCCTTCAAAAACTTCGTGAGAAAGAAGCTGAGGTTGAAGGCATCAATAGGAGGAACACTGAACTTGAGGAGCGAGTTGAGCAGTTGGCTCTTGAAGCAGATGCATGGCAACAGCGAGCCAGATACAATGAGAATATGATTGCTACTCTGAAGTTTAACCTTCAACAAGTATATGCCCAAAGCAGAGACATTAAAGAAGGGTGTGGTGACAGTGAGGTTGATGATACAGCTTCATGCATCAATGGCCGAACCATTGATTTTCATTTGCTCACGAAAGGAAACAACGATATGAAGGAGACGATGAAATGTAAGGCATGCAGAGTCAATGAAGTGACCATGCTTTTATTACCATGCAAGCATCTCTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTTTGTCCTCTATGTCAATCCTCTAAATTTATTGGCATGGAGGTCTATATGTAA 975 0.4226 MALPEHHFQRHHQPQPSNSLRHIHSIDFDDQMPQPLSYFNPNDFHHHPFHVVGLAPSDGSDGGADLKWNYGVEPERKRLIEQDFLENNSQISCVDFMQPQSVSTGLGLSLDNTRKSSAGDSALLSLLGSSIDRELLQQDAEIDRFLRVQGEQLRKTIMEKVQTTQLQSISIIEDRVLQKLREKEAEVEGINRRNTELEERVEQLALEADAWQQRARYNENMIATLKFNLQQVYAQSRDIKEGCGDSEVDDTASCINGRTIDFHLLTKGNNDMKETMKCKACRVNEVTMLLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVYM* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1215 324 MobiDBLite consensus disorder prediction 1 20 - -
Lan3g1215 324 PIRSF SBP1_RNase_bind 5 324 IPR017066 -
Lan3g1215 324 Pfam Zinc finger, C3HC4 type (RING finger) 276 314 - -
Lan3g1215 324 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 324 IPR017066 -
Lan3g1215 324 PANTHER F2G19.2 1 324 - -
Lan3g1215 324 ProSiteProfiles Zinc finger RING-type profile. 278 313 IPR001841 -
Lan3g1215 324 Coils Coil 173 214 - -
Lan3g1215 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 324 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1215 Lan-Chr3 24348286 24350942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1215 278 314 Miscellaneous Gene Families AT2G21380 45.946 6.19e-07 49.3