Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1203 ATGAGAAGCAGCATGAAGATGCATCATCTTGCACGTGGATTCTGGGAGCATGAACCACCCTCTCTCACGCTTGGGTGCAAACGCTTACGCCCTCTTGCCCCCAAGTTTTCCAACACTATCACTACTCCTAATTCTGTTACAACAACTTTGGATCTCAAGAGCTTCATTAGACCAGAAAGTGGCCCCAGAAAACCAATATCCTATGACAACAATGATAATAAGAATGATCCACCTACTTCACCTCAGAACCAGGTGGAAGCGCATATTGGAGGGACAAGGTGGAACCCGACACAAGAACAAATAGGAATATTAGAGATGTTGTACAAAGGAGGTATGCGAACACCAAATGCTCAAAAGATAGAGCAAATCACAGAACAGCTTAGTAAGTACGGAAAGATAGAAGGGAAGAATGTGTTTTATTGGTTTCAAAACCACAAAGCACGCGAGAGACAAAAGCAAAAGCGCAACACTCTTGACCTTGTTCATAGTCCACGTATGACAAGGGGAGAAGTAGTAGAAAGAGATTGGGAAGATAGTACGTATAAGAAGTATAGGAGATGGGGATTTGAGTGTTTGGAAGAGCCAAGTAAAGAGGAGGAAGAGGAATATAGAACTCTGGAGCTTTTTCCAATGCACCCGGAAGGCAAATGA 651 0.4332 MRSSMKMHHLARGFWEHEPPSLTLGCKRLRPLAPKFSNTITTPNSVTTTLDLKSFIRPESGPRKPISYDNNDNKNDPPTSPQNQVEAHIGGTRWNPTQEQIGILEMLYKGGMRTPNAQKIEQITEQLSKYGKIEGKNVFYWFQNHKARERQKQKRNTLDLVHSPRMTRGEVVERDWEDSTYKKYRRWGFECLEEPSKEEEEEYRTLELFPMHPEGK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1203 216 CDD homeodomain 92 153 IPR001356 GO:0003677
Lan3g1203 216 ProSiteProfiles 'Homeobox' domain profile. 97 152 IPR001356 GO:0003677
Lan3g1203 216 SMART HOX_1 89 156 IPR001356 GO:0003677
Lan3g1203 216 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 216 - -
Lan3g1203 216 Pfam Homeodomain 92 151 IPR001356 GO:0003677
Lan3g1203 216 MobiDBLite consensus disorder prediction 66 86 - -
Lan3g1203 216 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 216 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lan3g1203 216 SUPERFAMILY Homeodomain-like 90 156 IPR009057 -
Lan3g1203 216 MobiDBLite consensus disorder prediction 56 86 - -
Lan3g1203 216 Gene3D - 92 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1203 Lan-Chr3 24287088 24288814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1203 5 158 Wox Gene Family AT1G46480 63.030 7.40e-60 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan3g1203 Homeodomain 8.3e-19 CL0123