Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1201 ATGGAAGCTGGTGAAGATTGTTGCGTGAAGGTTGCAGTGCATGTACGGCCACTCATCTCCGACGAGAAGCTTCTAGGTTGCAAAGATTGTGTAACCGTTGTTCCTGCCAAGCCTCAGGTACGAATTGGCTCTCATTCCTTTACATTTGATCATGTTTATGGAAGCACTGGTTCTCCTTCATGTGCAATGTTCGAAGAATGTGTTGCTCCCCTTGTTGATGGCTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGCACAGGCCTTAAAGATGGTTATCAAACCGGAATAATACCCCAAGTTATGAATGTTCTCTTCAACAAAATTGGGACATTAAAGCACCAGACTGAATTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAGGAAGTAAGAGACTTGTTGGATCCCTCCCTCATGAGTAAACAAGACACTGTTAATGGACATGTAGGAAAAGCGACCTCTCCTGGGAAACCACCAATACAAATTCGTGAGACGTCAAATGGTGTCATTACCCTAGCAGGGTCTACTGAAGTCAGTGTTGCAACACTGAAGGAAATGGCTGCTTGCCTGGAACAGGGTTCGTTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGATCTCATGCCATCTTCACTATCACATTAGAGCAAAAGCGGAAGATCAATATTCCCGATGACAGCAGTTTAAATGATACTATGAATGAAGATTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGGACAGGGTCTGATGGTCTGCGTTTCAAGGAAGGAGTTCACATTAACAAAGGTCTTTTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGACTTCATGTTCCATATAGGGATAGTAAACTTACAAGGCTTTTACAGGATTCACTTGGTGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCAGCTGATATTAATGCGGAGGAAACCCTCAACACTCTGAAGTATGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTGATCAATAGAGACCCGATGTCCAATGAGATGCTAAAAATGCGACAACAGGTAGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGTGGTTCTTCTGTGGAAGTTCAGGTCCTTAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAAAATCTTTGCCGTGAACTTCATGAGTACCGCAGTAGGTGCTCTGTTGTCGAACAATGTGAAAAAGATGCTCATGATGGCAGCATATGCATTGCAAAGATTGATGGACTTAGGAGGAGCTTACCCATCATAGGGCCTGATTATCCAATGAATGAAACTGCAGGCGATTCAAAGGAAATTGAAGAAGTGGCAAAAGAGTGGGAGCACACACTTCTGCAAAATAGCATGGACAAAGAATTGCATGAGTTGAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTCGGAGCATCTGACGCTGAAGTACTCAAGCAGCACTTTGGAAGGAAGATCATGGAATTGGAGGATGAAAAGAGAGTTGTGCAGCGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAACCTTGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCATAAATTGAAAGCACTTGAAGCACAGATTATGGATTTGAAGAGGAAACAAGAGAGCCAGGTCCAGCTTATGAAGCAAAAGCAAAAAAGTGACGAAGCAGCAAAAAGACTGCAAGATGAAATACAATCTATAAAGGCTCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAGGCAGAACAATTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTGCTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGGCATAAGCTACAAGCTTTAAATCAGCGTCAGAAAATGGTCCTTCAGAGGAAAACTGAAGAAGCTGCTATGGCCACCAAGAGGTTAAAGGATTTGCTAGAAGCTCGCAAAACCTCCATCCGAGACACTTTAGTTACGATGAATGGAAGTGGAACAAATGGGCAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGATAAAAGAGCAAGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAGTTAGCCATGCTGAAGCAAGTGAACGAGTTTACTGCTAAGGGTCTCAGTCCTCCGAGAGGAAAGAATGGATTTACTAGAGCATCATACATGTCACCACATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGATCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGGGCCATCACTAGTCGTGGACGCTGGAATCAGTTGCGCTCAATGGGAGAAGCGAAGAATTTGCTTCAGTATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAGCTCTGGGAGAAGGACACAGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTCGGTCTATTACGACAAAGTGAGATGAAGAGAAAGGAAGTTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTGCAACTGCATTGGCTACACCAGCTTCTGGAAACTCTCCAAATTCATTGAAACACTATGCTGAAGACATGAAGGGTCCCTCATCTCCGATGCCTATGCCAACACCAAAACAGCTAAAGTTTATGCCCGGGGTTGCTAATGGCTTAGTGAGGGAATCAGCAGCATTTACGAATCAGAAAAGTCAGATGGTACCCATTGGGCAGCTTTCAATGAAAAAACTAGCTGCTGTGGGACAAGCTTCTGGCAAGCTATGGAAGTGGAAAAGAAGTCATCACCAGTGGCTACTACAGTTCAAGTGGAAGTGGCAGAAGCCATGGAGACTTTCGGAATTGATTCGACACAGCGATGAAACAATCATGAAAACAAGGCCACGTTCACAGGCTTTGCTACCTAGAAGGTGA 3087 0.4354 MEAGEDCCVKVAVHVRPLISDEKLLGCKDCVTVVPAKPQVRIGSHSFTFDHVYGSTGSPSCAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLKDGYQTGIIPQVMNVLFNKIGTLKHQTEFQLHVSFIEILKEEVRDLLDPSLMSKQDTVNGHVGKATSPGKPPIQIRETSNGVITLAGSTEVSVATLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQKRKINIPDDSSLNDTMNEDYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGLHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQVEYLQAELCARAGGSSVEVQVLKERIAWLEAANENLCRELHEYRSRCSVVEQCEKDAHDGSICIAKIDGLRRSLPIIGPDYPMNETAGDSKEIEEVAKEWEHTLLQNSMDKELHELNKRLEQKESEMKLFGASDAEVLKQHFGRKIMELEDEKRVVQRERDCLLAEVENLAANSDGQTQKLEDIHAHKLKALEAQIMDLKRKQESQVQLMKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKDLLEARKTSIRDTLVTMNGSGTNGQSNEKSLQRWLDHELEVMIKEQEVRFEYEKQSQVRAALAEELAMLKQVNEFTAKGLSPPRGKNGFTRASYMSPHARMARIASLENMLIISSNSLVAMASQLSEAEERERAITSRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDTEIREMKDQIKELVGLLRQSEMKRKEVEKELKVREQAVATALATPASGNSPNSLKHYAEDMKGPSSPMPMPTPKQLKFMPGVANGLVRESAAFTNQKSQMVPIGQLSMKKLAAVGQASGKLWKWKRSHHQWLLQFKWKWQKPWRLSELIRHSDETIMKTRPRSQALLPRR* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1201 1028 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1201 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1024 - -
Lan3g1201 1028 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan3g1201 1028 Coils Coil 861 895 - -
Lan3g1201 1028 Coils Coil 523 557 - -
Lan3g1201 1028 Pfam Kinesin motor domain 37 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1201 1028 CDD KISc_KIF4 7 364 - -
Lan3g1201 1028 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1201 1028 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1201 1028 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1201 1028 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1201 1028 Gene3D Kinesin motor domain 2 391 IPR036961 -
Lan3g1201 1028 Coils Coil 566 638 - -
Lan3g1201 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1024 - -
Lan3g1201 1028 Coils Coil 490 510 - -
Lan3g1201 1028 Coils Coil 671 691 - -
Lan3g1201 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Lan3g1201 1028 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1201 1028 Coils Coil 403 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1201 Lan-Chr3 24245119 24258008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1201 9 387 Calmodulin-binding Proteins AT5G65930 34.794 5.38e-53 200
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0895 14 15532586 15543803 Lan3g1201 3 24245119 24258008 LSH
Lan3g1201 3 24245119 24258008 Lan14g0895 14 15532586 15543803 PCT
Lan3g1201 3 24245119 24258008 Lan3g1201 3 24245119 24258008 PCT
Lan14g0895 14 15532586 15543803 Lan3g1201 3 24245119 24258008 PCT