Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1197 ATGGCTCATGATTTGTACTGTTCAGAAGAACAATGGGAGGAAAACATAGGTCTAAATGAGTTATTAGAATATAATGAGTGTGTTAGTGATTCCACTACTAGCACAATAATAAACTCAAACAAAATCTCAAACTACCCTCTTACGTTGTTAGAACAGGACATGTTTTGGGACGATGAAGAGTTAACATCATTATTAGCAAAAGAACAACTCAACCCACTTCATACTTGCATCGAACGTGACACAGTATTGGAGGGAGCGCGTGTAGAAGCTGTGTTATGGATTCTGAGAGTGAATGCACATTACTCCTTCTCTGCTCTCACTGCCATTCTTGCTGTTAACTACCTTGACAGGTTCCTCTTCAGCTTCAGATTTGAGACTAGGAAGCCATGGATGATTCACCTTTCTGCTGTTGCGTGTATCTCACTCGCAGCCAAGGTGGAAGAGACCCAAGTTCCTCTTTTACTTGACCTCCAAGTTGAGGATAGTAAATACTTGTTTGAAGCTAAAACGATTAAAAGGATGGAAATTTTGGTGCTTTCCACTCTTGGATGGAAGATGAACCCACCAACCCCTCTCTCATTTCTTGAGTATATCATAAGAAGACTTGGATTGAAGAATGATTTTAATCTTTGCTTTGAGTTCCTCAAGAGATGCGAATCCCTTCTAATCTCTCTCATTCCAGATACAAGGTTTATGAGTTACCTACCTTCTGAGTTGGCAACTGCTACGATCATGCATGTTATCAACAGCGTGGAGCCTAGTCTTGGAGCTGAATACATAAACCAGCTTCTTGGTATTCTTGGAACCAACAAGGAGAAGATTGATGAATGCTGCAAGGTTATGTTGGAGGTGTGTTCAGCGTATGAACAGAGGAAGCAATGGAATAAGCGAAAGTTTGGGTCCATTCCAAGTAGCCCAAGTGGTGTAATGGACGTGTCATTTAGTTCTGATAGCTCAAATGATTCATGGGCACTTTCTACTTCTGCTCCTGCTTCTGTTTCATCCTCACCAGAACCATTGTTCAAGAAGACTAGGACTCAAGACCAGATTCTACTAAACTATTCCACTTCAGAATTTCTCACCATTCCTCGCTAG 1095 0.4119 MAHDLYCSEEQWEENIGLNELLEYNECVSDSTTSTIINSNKISNYPLTLLEQDMFWDDEELTSLLAKEQLNPLHTCIERDTVLEGARVEAVLWILRVNAHYSFSALTAILAVNYLDRFLFSFRFETRKPWMIHLSAVACISLAAKVEETQVPLLLDLQVEDSKYLFEAKTIKRMEILVLSTLGWKMNPPTPLSFLEYIIRRLGLKNDFNLCFEFLKRCESLLISLIPDTRFMSYLPSELATATIMHVINSVEPSLGAEYINQLLGILGTNKEKIDECCKVMLEVCSAYEQRKQWNKRKFGSIPSSPSGVMDVSFSSDSSNDSWALSTSAPASVSSSPEPLFKKTRTQDQILLNYSTSEFLTIPR* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1197 364 Gene3D - 75 187 - -
Lan3g1197 364 SMART Cyclin_C_2 189 318 IPR004367 -
Lan3g1197 364 PANTHER CYCLIN D3.1 PROTEIN 32 345 - -
Lan3g1197 364 Pfam Cyclin, N-terminal domain 72 187 IPR006671 -
Lan3g1197 364 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
Lan3g1197 364 Pfam Cyclin, C-terminal domain 189 316 IPR004367 -
Lan3g1197 364 SMART cyclin_7 92 180 IPR013763 -
Lan3g1197 364 PANTHER CYCLINS 32 345 IPR039361 -
Lan3g1197 364 SUPERFAMILY Cyclin-like 55 187 IPR036915 -
Lan3g1197 364 Gene3D - 188 279 - -
Lan3g1197 364 CDD CYCLIN 87 179 IPR013763 -
Lan3g1197 364 SUPERFAMILY Cyclin-like 172 306 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1197 Lan-Chr3 24223032 24224891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1197 53 349 Core Cell Cycle Gene Families AT5G67260 51.495 2.50e-89 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0893 14 15520360 15522235 Lan3g1197 3 24223032 24224891 LSH
Lan3g1197 3 24223032 24224891 Lan14g0893 14 15520360 15522235 PCT
Lan3g1197 3 24223032 24224891 Lan3g1197 3 24223032 24224891 PCT
Lan14g0893 14 15520360 15522235 Lan3g1197 3 24223032 24224891 PCT