Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1196 ATGGGAGGCTGGGCTATTGCTGTGCATGGTGGTGCTGGTGTGGACCCTAATCTCCCACCACAACGCCAAGAACAAGCCAAGGAACTTCTCACACGTGTTCTTAATCTTGGCATCTCTGCTCTTCGTTCCAATGCTACCGCCATCGACGTTGTTGAACTTGTCGTGAGAGAACTAGAAACTGATCCAGTGTTTAACTCAGGACGTGGATCTGCTTTAACGGAGAAAGGAACGGTTGAAATGGAAGCGAGTATCATGGATGGGACAAAGAGAAGATGCGGCGCCGTTTCAGGACTTACCACCGTGAAAAATCCCATTTCACTCGCTCGTCTTGTTATGGACAAATCTCCTCATTCCTATCTTGCTTTTTCTGGTGCTGAAGATTTCGCTAGACAACAGGGTGTGGAGTTGGTGGAGAACGAGTACTTCATTACTCCTGAAAACGTTGGAATGTTGAAATTGGCCAAAGAAGCAAACACAATTCTGTTCGATTACAGGATTCCAACATCTGGATACGACACATGCAGTGCAGCAATTGAGAGTCCTTTGGTTATGAACGGACTCCCAATCAATGTCTACGCGCCGGAGACGGTCGGGTGCGTGGTGGTGGACCTGGAGGGCCGGTGTGCAGCTGCAACATCAACAGGAGGACTCATGAACAAGATGACAGGTAGGATCGGTGACTCGCCAATGATTGGTGCTGGAACATACGCTTGTGAAGTGTGTGGTGTGTCATGTACCGGTGAAGGGGAAGCAATCATACGCGGGACACTGGCGCGTGAGGTTGCAGCTGTGATGGAGTACAAGGGACTAGGACTTCAAGATGCTGTGGATTTTGTTATTAAGAATAGGCTTGATGAAGGGTTCGCTGGACTCATAGCAGTGTCAAATAAGGGTGAAGTGGCTTACGGGTTTAACTGTAATGGCATGTTTAGGGGATGTGCTAGTGAAGATGGGTTCATGGAAGTTGGGATATGGGAGTAG 981 0.4862 MGGWAIAVHGGAGVDPNLPPQRQEQAKELLTRVLNLGISALRSNATAIDVVELVVRELETDPVFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARQQGVELVENEYFITPENVGMLKLAKEANTILFDYRIPTSGYDTCSAAIESPLVMNGLPINVYAPETVGCVVVDLEGRCAAATSTGGLMNKMTGRIGDSPMIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQDAVDFVIKNRLDEGFAGLIAVSNKGEVAYGFNCNGMFRGCASEDGFMEVGIWE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1196 326 CDD Asparaginase_2 5 318 - -
Lan3g1196 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Lan3g1196 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Lan3g1196 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Lan3g1196 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Lan3g1196 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1196 Lan-Chr3 24204262 24206540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1196 6 286 Miscellaneous Gene Families AT4G00590 26.403 3.32e-18 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0892 14 15504491 15506967 Lan3g1196 3 24204262 24206540 LSH
Lan3g0492 3 4547149 4550192 Lan3g1196 3 24204262 24206540 PCT
Lan3g1196 3 24204262 24206540 Lan3g0492 3 4547149 4550192 PCT