Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1181 ATGCAAAAGAAGAAGAAGAAAAGTAGATTTAGTGGGGCGTCAAGATGCGCGAAGAATGAACGGTCAAGGAAGAATCAGAAGGTTGAGAAAAAGAATAAGGTAGTAGAAGAGATTAATGCAGGAGCAGATGGACAAAGTTGTAGTAGTTACACCTCAGAAAACGATAATGCTTACCAGGAAAATAATGAAGGAATAACTTCAGTATCGAAATCACATGCCTCTCTCAACTCAAATGGGAAAACAAGAGCTAGTAGGGGATCAGCAACAGATCCTCAAAGCCTCTATGCGAGGAAAAGAAGAGAGAGGATAAATGAGAGACTAAGAATTCTACAGAATCTTGTTCCCAATGGAACAAAGGTTGATATAAGCACAATGCTTGAAGAGGCAATCCATTACGTGAAACTTTTGCAGCTTCAGATCAAGCTTTTGAGCTCTGATGATTTGTGGATGTACGCTCCGATTGCTTATAATGGATTTGATATTGGACTCGATCTCAATAGGAAGGTTTCTCAGCCTCAATGA 522 0.3966 MQKKKKKSRFSGASRCAKNERSRKNQKVEKKNKVVEEINAGADGQSCSSYTSENDNAYQENNEGITSVSKSHASLNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAIHYVKLLQLQIKLLSSDDLWMYAPIAYNGFDIGLDLNRKVSQPQ* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1181 173 MobiDBLite consensus disorder prediction 13 37 - -
Lan3g1181 173 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 153 IPR036638 GO:0046983
Lan3g1181 173 MobiDBLite consensus disorder prediction 42 91 - -
Lan3g1181 173 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 136 IPR011598 GO:0046983
Lan3g1181 173 CDD bHLH_AtIND_like 88 150 - -
Lan3g1181 173 SMART finulus 93 142 IPR011598 GO:0046983
Lan3g1181 173 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 2 167 - -
Lan3g1181 173 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 2 167 - -
Lan3g1181 173 Gene3D - 88 145 IPR036638 GO:0046983
Lan3g1181 173 MobiDBLite consensus disorder prediction 1 98 - -
Lan3g1181 173 Pfam Helix-loop-helix DNA-binding domain 97 137 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1181 Lan-Chr3 24032552 24033818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1181 5 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 58.011 4.39e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan3g1181 HLH 1.9e-08 No_clan