Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1175 ATGTTGTGTGCTTGCTCCGGGGAGCAACACAAATTTGAAGAGGCGCCACAGTCGCCGGAGTCTCTAGCAACTAGGGATTTTTCTGCAAGTGGACTTTCTTCTAGGACTGGTGATTGGGAATCTAAATTGGATGAAGCACAAGTTGAAGAAGCTGAATCTACTTTAAAAGAAGCTCTTTCCTTAAACTATGAGGAAGCTAGAGCTTTGCTGGGGAGGCTTGAATATCAACAAGGGAACTTTGAGGCTGCCCTTCAAGTATTTCAAGGCATAGACATCAAGGGTTTGATCCCGAAGATGATCAGGGCGATTTCTGAAAGAACCAAGCAAAATAAATCGCATTCCAAGGCAGATATTGCTGTGATTCCTAATGTGATGTCACTGCATTCAGTAAGCTTGCTTTTAGAGGCAGTTCTGCTTAAAGCAAAATCATTAGAGGGACTTGGGAGATACACTGAGAGTGCAAAGGAGTGCAGAATAATTCTGGATATCGTTGGATCAGCCTTTCCTAATGGAATGCTCGAGGGTATCAGTGAAGACTGTAAGTTGCAAGAAATGTTTCACAGAGCATTGGAGTTGCTTCCAAACCTATGGATCAAGGCTGGCTTTCTAGATGAAGCTGTCACTGCATATCGCCGTGCTCTGGTCAAGCCATGGAATTTGGAACTACCGAGGTTGGCTGCTTTACAGAAAGATTTAGCTACAACGCTTCTTTATGGAGGCGTTGAAGTGGGTCCACCCTCTCCTTTGCAAGTGTCGGGTCCAGCAACCTTAAAGAGTAATGTTGAAGAATCAATACTTTTGCTATTGATACTGATGAGCAAGATGGCAATTCAGGAAATAGTCTGGGATGCTGAAGTAATGGATCATCTTACATTTGCACTTTCGGTTACTGGGATGTTTGAGACATTGGCAGATCGTGTAGAGCAGATCCTTCCAGGTATCTATGATCGAGCTGAGAGGTGGTACTTTCTTGCTTTGTGTTATAGCGCAGCGGGACACAATGAAGAAGCATTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCTGAAGAAACACATAGACCCCATTTTCCTTCATTCTTGTTTGGAGCAAAACTGTGTTCCCAACATCCCAGCTATGCTCATGAAGGCATTAAATTTTCACGTGAAGTTATTGATCTAGCCAAGAATCAAAATGAGCATTTTTTGGGCGAAGGACGCAAATTTCTTGGCATTTGCTATGGGGCCGCAGCTAGACTTTCTGCACTGGATTCTGAAAGAAGTATATTTCAAAGAGAGTCTTTGGACTTTCTAAACCGGGCTGCTGTAAATGGAAACGGTGACCCAGAAGTGATATTCAGCCTTGGGCTGGAAAATGCATTTCAAAGGAATCTGGACGCAGCTTATGACAACATAATGATTTATTCGGATGTGACCATTGGCAGCTCTGCAAGAGGTTGGCAGTTGCTAGCACTCATAGTATCTGCACAGCAGCGGTTTAAGGATGCTGAAACAATAGTTGATTTTGCTTTAGATGAGGCTGGGCGGACGGATCAGTTAGAACTTCTAAGATTGAAAGCGGTGCTTCAAATATCTCAGCAGCAACCCAAACAAGCAATAGAAACCTACAGAATCTTGTTAGCGCTAATTCAAGCAAAAAGGGAGCTTTGGCTTCAAGATATGAACATTGATCAAGCTAAAGAATTCAAGCATGAGGTATTAACTGAAAGGAAGTTGGAAATGGAAGCCTGGCAGGATTTAGCTACCATTTACAGAGATATCGGTTCATTGCTTGACGCAAAAGCTTGTGTTAACAAAGCCCAGTTCATAGAATTTTTCTCTCCAAGAAGTTGGCATATTACAGGGATGTTGTTTGAAAGTCAATCATTATACAAAGAGGCCCTTGTTTCTTTTTCAGTCTCGTTATCAATAGAACCTGATTACATTCCCAGTATCATTTCAACTGCGGAATTGTTGCTGAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGCTTTTTGATGAATGCTTTGCGATTAGAACCCACAAACCATGATGCATGGTTCAACCTAGGATTGGTTTCAAAAAGGGAAGGTTCATTGCAACAAGCAGCAGATTTCTTTCAAGCTGCATATGAACTAAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTAA 2151 0.4217 MLCACSGEQHKFEEAPQSPESLATRDFSASGLSSRTGDWESKLDEAQVEEAESTLKEALSLNYEEARALLGRLEYQQGNFEAALQVFQGIDIKGLIPKMIRAISERTKQNKSHSKADIAVIPNVMSLHSVSLLLEAVLLKAKSLEGLGRYTESAKECRIILDIVGSAFPNGMLEGISEDCKLQEMFHRALELLPNLWIKAGFLDEAVTAYRRALVKPWNLELPRLAALQKDLATTLLYGGVEVGPPSPLQVSGPATLKSNVEESILLLLILMSKMAIQEIVWDAEVMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACGSSEETHRPHFPSFLFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPEVIFSLGLENAFQRNLDAAYDNIMIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDEAGRTDQLELLRLKAVLQISQQQPKQAIETYRILLALIQAKRELWLQDMNIDQAKEFKHEVLTERKLEMEAWQDLATIYRDIGSLLDAKACVNKAQFIEFFSPRSWHITGMLFESQSLYKEALVSFSVSLSIEPDYIPSIISTAELLLKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKREGSLQQAADFFQAAYELKLSAPVQKFE* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1175 716 ProSiteProfiles TPR repeat profile. 607 640 IPR019734 GO:0005515
Lan3g1175 716 Pfam Tetratricopeptide repeat 668 705 - -
Lan3g1175 716 Pfam Tetratricopeptide repeat 44 88 - -
Lan3g1175 716 ProSiteProfiles TPR repeat profile. 677 710 IPR019734 GO:0005515
Lan3g1175 716 Gene3D Tetratricopeptide repeat domain 262 544 IPR011990 GO:0005515
Lan3g1175 716 Gene3D Tetratricopeptide repeat domain 545 712 IPR011990 GO:0005515
Lan3g1175 716 Coils Coil 56 76 - -
Lan3g1175 716 PANTHER PROTEIN NPGR1 1 715 - -
Lan3g1175 716 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Lan3g1175 716 SUPERFAMILY TPR-like 565 707 IPR011990 GO:0005515
Lan3g1175 716 SUPERFAMILY TPR-like 189 533 IPR011990 GO:0005515
Lan3g1175 716 MobiDBLite consensus disorder prediction 5 40 - -
Lan3g1175 716 MobiDBLite consensus disorder prediction 21 37 - -
Lan3g1175 716 SUPERFAMILY TPR-like 47 461 IPR011990 GO:0005515
Lan3g1175 716 Gene3D Tetratricopeptide repeat domain 15 240 IPR011990 GO:0005515
Lan3g1175 716 SMART tpr_5 607 640 IPR019734 GO:0005515
Lan3g1175 716 SMART tpr_5 573 606 IPR019734 GO:0005515
Lan3g1175 716 SMART tpr_5 318 351 IPR019734 GO:0005515
Lan3g1175 716 SMART tpr_5 512 545 IPR019734 GO:0005515
Lan3g1175 716 SMART tpr_5 677 710 IPR019734 GO:0005515
Lan3g1175 716 SMART tpr_5 476 509 IPR019734 GO:0005515
Lan3g1175 716 Pfam Tetratricopeptide repeat 318 349 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1175 Lan-Chr3 23988280 23992179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1175 1 715 Calmodulin-binding Proteins AT1G27460 57.997 0.0 830
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1175 3 23988280 23992179 Lan3g1175 3 23988280 23992179 PCT