Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0510 ATGAAACAATCTATGTTGCCTCCAAAGAAGCGAAAGTATGTGGGACCTTCATCAGAATCACCACGATCTTCGCCGCTAGTAGAATTTGAAGAAAGGCCACCCTCTTCACAAACCCTAACTGTGCTATCAACTCAGTCATTGACTCGAAAAGAGATCGCTGTGAAGCAACGAAACATGGATGAAATTCGAAGAGTGTACAAATGCCTGAAGCATATAAATGTTTGCTTGTCTCAAGAAGACAAATCTTTTGCGTCTGACATTGAAAAGGGTTATCTCACTCTCATTGCTGCTTCCAAAGGTTGTAGGAGTGTGCGACGTATTGTGGCTGATCTTATTCCTCAATATGCATGTTACTGCCCAACAGCTTTGGAAGCTGCAGCTGAAGTGATGATTAATATGCACAACTGGAGTTTGGAATTGATTAACAGAGGAGAAGATTCTAATGGTATTGCATTTGCAACTGCTAGAGCCTGTATTTTTGGCCTAGCTGACATCTGCTGCACTGCTTCTTCGGTGGCACCAAAATCTGCTGTGATTAGGGGAATTAGCTCTGCAGTTTTTCAGAATGTGTTAACCTTTTTTATGGCCTTCTTTGAAGGGAAGGATGTTATGCAGTTGGTTGACAAGAATTTCCTGAATATGCAAGATTCCATCAAGGTCTTCTCAGAGTTGAAGCAAAAAGTTTTAGATAAAGATGAATGTTTATTGACTAAACTGACCAGATCCTGTGCATTGTGTCTACTTTGGATTTTCTTCTCTTGTCCAAAAGACTTGCTTGCAGCTTGCTTGGAGCTCTCAGGCTGTGCCGCAAAAGAAAAAGCTTCCAAAGGGCACCATTTTCTGGGCTTCGTGACTAGCACCTTGGATGATGGTGCAGTTCAACTTTTGGATAGTGCAAATGTTGGACCTAAATCATGCACAGGTTCTACTCGTTCATACATCAGATATCATGAGGGTGATGAGGAAATTAAGACTGATGACAACCATGTTTCTGAGTGTAATTCATCACTTCGTAGTAGCTGCTTGCTCATGCAGGTTCTTAACAAGGACTCCTCACTGAGGGAATGGATGTTGTGTGGATGTAAGAAGTTATTGGACTTGCTTACTGATTCTTCGCCTGAAATTTCGTCAGTACTTGAAGGAATTATTGAAATGTTTGCTCAACAAGCAGATTTGGAAGACTGCCAGGTAGATAGTGATGAAGATAAACCCGATAGTTCAATTTATATGAATAGGAACTGTGTGGTTCCTAGGATCTCTGAGGAACATGACATTGTTGACAAATCATCTGGAAAAGTTGGCAATTCAAGTTTTCTTGTCAATTCATCTACTGATTGTCTCACCGATAAAGTTAGTGATAAACATTTGATAGCTCAAGGCTCTGCAGTTATATGTTCCACACCCAGAGACTCAGTAAGCCATCAGATATCCCCATCTGGAGTTAGAATACCAGTGGACTTTAAGAGTACTTCATGTGAAGTTAGTGGCGATTTCACAAATGTTGAGAAAAACCAAGTATTTAATATGAATTTGAATTCACCTCCAGTAAGGTCTTCTAGTGAAACTGAAAGTAAAATTCTTATATTACCCAATAATTCGTTTATGTCACCATCTGCATCGAAAAGTCAAATTGCTTGGTGCAGTGATGGGGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAAGCAGCTCTGGGTAGGTTGTGTAGGGCCTGACATGTCTGAAAGCCATATTAGGTTTCACTTAGAGAGGTTTGGTCCTATTGAAAAATATTTTTTCCTCTCAGTGAAAGGATTTGCCTTAGTTGAGTATAGAAATATCATTGATGCGGTAAAAACTCGACACTGTTTACCTGGAAGTTTTCCATGCTGTGTAAAATTCATGGATATAGGATTTGGAACTCGGGGTGATATGAATGGTTTGGCCATTGGCTATAGTTCTTATATATACGCTGGACGTATTTCCAGTCAATTGGCCAAGGATGAGATCCTGCATGAAGCTTGGAAAGTAATTCGTAAGCGTCCTCTCTCAGTTATTGATCTTAGCTGTGAGTGTGCATTACTGATGGAGTTTGAAACTCCTGAAGAAGCTGTCTCTGTGATGTTGCATCTAAGACAGTTCCGAAGAGAAAGAAGTAATTATAACCCACATTCTGCTCCAGAAACAGGTAATGCTGGAATTGGACAGGTTTATTCGGATGGTGCAATACATGTGCCTGGCCCTCCCCATCTTGAGCTTAGAATCAACAACCAAGTTGCTGGACCATCTCATGCTCGGACTTCACCCGAGAACCCTGCTGACAGTGCTCACACTAGGATGTCTCACTTGAGTTCTTTACTAGCATCGTTGCGTACAAAGTATAATATTAATCAGAACATAGGTCTCCATGATAACTATATTGCTGGAAATAGTTATGCTTTTTCCATGTGTGGTGAAGATATAGTTCCATCCAGCACTCTGTGGATAACTATTCCAAGTAGCGGCTCTCTGTTTCTCACGGATGATGAGCTAATGGCCATTTGCATCCTTGCTGTTGGAAACTCTGGCTCCATAGTGCGGTTGACACAAGCAAATATGAACATGGGATGTGGTTGGTTTGTTGAATGCAATAATGTTGATGCTGCAGTTTCTGTTCTTAAGAATCTTCGTGCTTGTCCAGGATTATTCTTCCAGATTCAATTCAGCAAACCTGGAAATCAGAATGTTCTGCCATTTCCAATTACGCTGGAGAAAAAATCTATGGAGCACGTATCCCCCAGAATAAATTCTGAGAATCATGGTGGTGGTGTACATGGTGCACCTATGTCTCAGTCGAACTGGCACTTTCCTGGTTCCAGGGAGATGACAAAAGTTGGAGCAAGGAAGGCTGATGGTTATGATAATTTATCAATGGTTCCTCAACAAGGAGGTAATGTTACACGTTCACTCTCTGTAACACAAGGACCTTCCTTTCCACCACCACAACAAATTCAATCCTCTACAGGCATTCGCCCGATATATGGTCCTCCAAATGGTCCATGGGGTTCACAGGGAAGGAATAATCATTTACCTGTCAATAAATTCAGGGCAGGAGTAATGCCAAATAATTCTCATGGCGGTGCTGCTCTAAATCCTTTTGTACCTGCTTCAGTAACTCTATTTGCTCAGATACAGGGAACTCCAATGCAGCCTTATAACCAGCTTATTCCTCAACCAGTTATACGACCACCTTTATCATCTTTGCCACATCCTCACCCTGAAATACTGGCTCTGCCTCCTTTACCCCAGACACAGCCACCCTTGATTCCTCCACCGCCTTTATCATCTCCGCCACATCCTCACCCTGAAATACTGGCTCCGCCTCCTTTACCCCAGACACCGCCACCCTTGATTCCTCCACCGCCTAGTTCTCCTCCTCCATCACCTCATCCACCACTGCCTGTCCAAGAATCAGTCAATATGGAATGTTCAAGTCAGTCTCTGCAGTATCAATGGCATGGGACTCTCTGTAAAAGCGGGGTTGACTACTGTACAATTTATGCATGCAGAGCAGATTCAAATATTTGCAGCTACACAAATGCCATACCTGAGCCTGCTGAATGGCCCACAAAACTAGACATGGCTAAGCGCACCAATTTCCAACATGTAAAATCAGCATTTACTGCTACTCCACCCGACAGAAGAGAAGTATGCAGTTTGATCCCATCTTCCACAAGTAATCAGAGAAAGTTTCAGGAGTTCGTATCATACTTAAAGCAGAAGGACTACGCCGGAGTTGTTAAAATCCCAGCTGCAAAATCCATATGGGCAAGGCTGATATTCGTACTCCCCCACTCACTTGAAACATGCTCTTTGCTTTCTATTTCACCTGCTGATCGATCTGATTGCCTCATCGCTTTGGTTCTGCCCTGTAATCCTGTTTCATAG 3906 0.4242 MKQSMLPPKKRKYVGPSSESPRSSPLVEFEERPPSSQTLTVLSTQSLTRKEIAVKQRNMDEIRRVYKCLKHINVCLSQEDKSFASDIEKGYLTLIAASKGCRSVRRIVADLIPQYACYCPTALEAAAEVMINMHNWSLELINRGEDSNGIAFATARACIFGLADICCTASSVAPKSAVIRGISSAVFQNVLTFFMAFFEGKDVMQLVDKNFLNMQDSIKVFSELKQKVLDKDECLLTKLTRSCALCLLWIFFSCPKDLLAACLELSGCAAKEKASKGHHFLGFVTSTLDDGAVQLLDSANVGPKSCTGSTRSYIRYHEGDEEIKTDDNHVSECNSSLRSSCLLMQVLNKDSSLREWMLCGCKKLLDLLTDSSPEISSVLEGIIEMFAQQADLEDCQVDSDEDKPDSSIYMNRNCVVPRISEEHDIVDKSSGKVGNSSFLVNSSTDCLTDKVSDKHLIAQGSAVICSTPRDSVSHQISPSGVRIPVDFKSTSCEVSGDFTNVEKNQVFNMNLNSPPVRSSSETESKILILPNNSFMSPSASKSQIAWCSDGDPAAMDIVSASKQLWVGCVGPDMSESHIRFHLERFGPIEKYFFLSVKGFALVEYRNIIDAVKTRHCLPGSFPCCVKFMDIGFGTRGDMNGLAIGYSSYIYAGRISSQLAKDEILHEAWKVIRKRPLSVIDLSCECALLMEFETPEEAVSVMLHLRQFRRERSNYNPHSAPETGNAGIGQVYSDGAIHVPGPPHLELRINNQVAGPSHARTSPENPADSAHTRMSHLSSLLASLRTKYNINQNIGLHDNYIAGNSYAFSMCGEDIVPSSTLWITIPSSGSLFLTDDELMAICILAVGNSGSIVRLTQANMNMGCGWFVECNNVDAAVSVLKNLRACPGLFFQIQFSKPGNQNVLPFPITLEKKSMEHVSPRINSENHGGGVHGAPMSQSNWHFPGSREMTKVGARKADGYDNLSMVPQQGGNVTRSLSVTQGPSFPPPQQIQSSTGIRPIYGPPNGPWGSQGRNNHLPVNKFRAGVMPNNSHGGAALNPFVPASVTLFAQIQGTPMQPYNQLIPQPVIRPPLSSLPHPHPEILALPPLPQTQPPLIPPPPLSSPPHPHPEILAPPPLPQTPPPLIPPPPSSPPPSPHPPLPVQESVNMECSSQSLQYQWHGTLCKSGVDYCTIYACRADSNICSYTNAIPEPAEWPTKLDMAKRTNFQHVKSAFTATPPDRREVCSLIPSSTSNQRKFQEFVSYLKQKDYAGVVKIPAAKSIWARLIFVLPHSLETCSLLSISPADRSDCLIALVLPCNPVS* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0510 1301 SMART rrm1_1 563 626 IPR000504 GO:0003723
Lan3g0510 1301 SUPERFAMILY RNA-binding domain, RBD 548 621 IPR035979 GO:0003676
Lan3g0510 1301 Pfam SPOC domain 1151 1294 IPR012921 -
Lan3g0510 1301 MobiDBLite consensus disorder prediction 1069 1142 - -
Lan3g0510 1301 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 2 1109 - -
Lan3g0510 1301 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1110 1297 - -
Lan3g0510 1301 MobiDBLite consensus disorder prediction 17 33 - -
Lan3g0510 1301 MobiDBLite consensus disorder prediction 1 33 - -
Lan3g0510 1301 PANTHER NUCLEIC ACID BINDING PROTEIN 1110 1297 - -
Lan3g0510 1301 PANTHER NUCLEIC ACID BINDING PROTEIN 2 1109 - -
Lan3g0510 1301 MobiDBLite consensus disorder prediction 1069 1140 - -
Lan3g0510 1301 Gene3D - 553 646 IPR012677 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0600 10 5260046 5261940 Lan3g0510 3 4834297 4847214 LSH