Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0504 ATGGCTGCAAGTAGCAATGGCAATGATGGTATCCAAAAAACAAATCCTTTTTCAATGAGACCCATCATTCCTTCTGATTCTGAAGACTTATCTTCTTTCTTCAACCAACTCCTTTCTCCACCACCACCATCACCACCACCAGAGATGGACCCAAATAACTCTTTCTCTGACCCAAATAATTTTTATGCTTACATCCCTGATCCTTCTCTTTTTCTTCACAATTCTCATTCCAACAACACCACTACATGTGATTTCACTTCTTCTCTTGAGAAGAATGGTGAGGCTTTGGAGTTGCCATCATCAAAGCCTTTCCCACCATCACGTACTTCCTCAAAGAGGAGCAGAGCTGCAGAGTTTCATAATTTGTCTGAAAAGAGAAGAAGGAGTAGAATTAACGAGAAAATGAAAGCCCTGCAGAACTTAATTCCGAATTCTAATAAGACAGACAAAGCTTCAATGCTAGATGAGGCCATAGAATATTTAAAGCAGCTTCAGCTTCAAGTACAAATGTTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGTCTTCACCAGGAGGACTAAGACCTATGATATTGCCTCAGACAGGATTGAATTTCGATGAGGTTAATGGATTTCAGAATTCTAACAGAGGAATTGCCTCATCTGCAAATGTCGAAAGCTTGGTGCCGCCTTCTTATAATTTTTCGAAGCATTGCAGCTTCTCAGATCAGTCTATTGTTCCACCATCAGTGACAAATGTAACTACTTCACATCCCTCAACTAGTATTCAACCACATATTAAGGATTCATTTTGTGGCAGCATGCCTCAACTGCTTCTGGATACAACAAAGATGGGAAAAGCTCCTTCTTCAGATGTGTCTTAA 867 0.3991 MAASSNGNDGIQKTNPFSMRPIIPSDSEDLSSFFNQLLSPPPPSPPPEMDPNNSFSDPNNFYAYIPDPSLFLHNSHSNNTTTCDFTSSLEKNGEALELPSSKPFPPSRTSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMSSPGGLRPMILPQTGLNFDEVNGFQNSNRGIASSANVESLVPPSYNFSKHCSFSDQSIVPPSVTNVTTSHPSTSIQPHIKDSFCGSMPQLLLDTTKMGKAPSSDVS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0504 288 SMART finulus 121 170 IPR011598 GO:0046983
Lan3g0504 288 PANTHER TRANSCRIPTION FACTOR SPATULA 73 263 - -
Lan3g0504 288 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 73 263 IPR031066 -
Lan3g0504 288 MobiDBLite consensus disorder prediction 113 128 - -
Lan3g0504 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 175 IPR036638 GO:0046983
Lan3g0504 288 CDD bHLH_AtPIF_like 115 177 - -
Lan3g0504 288 MobiDBLite consensus disorder prediction 1 21 - -
Lan3g0504 288 MobiDBLite consensus disorder prediction 96 128 - -
Lan3g0504 288 Gene3D - 110 174 IPR036638 GO:0046983
Lan3g0504 288 MobiDBLite consensus disorder prediction 1 59 - -
Lan3g0504 288 MobiDBLite consensus disorder prediction 38 52 - -
Lan3g0504 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 115 164 IPR011598 GO:0046983
Lan3g0504 288 Pfam Helix-loop-helix DNA-binding domain 119 165 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0504 Lan-Chr3 4735458 4738342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0504 82 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 72.650 2.82e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan3g0504 HLH 3.4e-14 No_clan