Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0496 ATGGGTTCGACTAGATCGAACACCTTCACCATGATCCTCCTCATATTCACGCTCTTAGCACTTTCATCAGCCATAGACATGTCCATAATCTCGTACGACAAAACCAACATACACAGAACCGACGATGAGGTCATGACCCTATACGAGGAGTGGCTAGTGAAGCATGGAAAACTTTACAACGCGCTTGGTGAGAAGGAAAAGCGGTTCGAGATCTTCAAAGATAATCTTCGGTTCATTGATGAGCATAATGATTATGATGTGAACCGGACCTATAAGCTTGGGTTGAACCGGTTCGCTGATCTGACCAATGAGGAGTATAGAGCTAAGTTCGTTGGAAGTAGGATTGACTCTAATAGGAGGGTGGGTAAGTTGAGGAGTAGGAGCAATCGTTATGCGCCACGTGTCGGTGATAAGTTGCCTGAATTTGTTGATTGGAGGAAGGAAGGTGCTGTTGTCGGAGTCAAAGATCAAGGAGGGTGTGGGAGCTGTTGGGCATTCTCAGCAATAGCTGCAGTGGAAGGCATAAACAAGATTGTGACAGGTGATCTGATTTCACTGTCAGAACAAGAGCTGGTAGATTGTGATAGATCATACAATGAAGGATGCAATGGTGGAATTATGGACTACGCCTTTGAGTTCATCATCGACAATGGTGGCATCGACTCCGAAGAGGATTACCCCTACAAAGCTGTTGATGGTAGATGTGACCAATACAGGAAAAATGCTAAAGTTGTTGCAATTGATGGTTATGAAGATGTTCCTACATATGATGAGAAAGCCTTGCAAAAAGCTGTTGCAAATCAGCCCGTGGCCGTCGCTATCGAAGGAGGTGGCCGGGAATTCCAATTATATGAATCTGGTATATTTACTGGTAGATGTGGAACTGCATTGGACCATGGTGTTAACGCTGTTGGATATGGTACAGAAAATGGCAAAGATTATTGGATTGTGAGGAATTCATGGGGTCCTAACTGGGGAGAAAATGGCTATGTCAGACTGGAACGTAATCTAGCCAATAGCAGAGCCGGCAAGTGTGGAATTGCAATCGAGCCATCTTATCCCGTTAAGAATGGCCAGAATCCTCCAAAACCTGGACCATCACCCCCAACACCTGTGCAGCCACCATCTGTCTGTGACAACTACTATAGCTGCACTGCGAGCACTACTTGTTGCTGTATCTTCGAGTTTGGAAACTCTTGCTTTGAGTGGGGATGCTGTCCTCTTGATGGTGCTACCTGCTGTGATGACCACTACAGTTGCTGTCCACATGAGTATCCCATATGCAACGTTAATGCCGGAACCTGTCTAAGGAGCAAGAACAACCCATTTGGAGTGAAAGCATTGAAGCGAACTCCGGCTCTGCTCCGCGCTTCAGTTGGAAGTGAGAACGAGGTAAGCAGTGCTTAA 1407 0.4598 MGSTRSNTFTMILLIFTLLALSSAIDMSIISYDKTNIHRTDDEVMTLYEEWLVKHGKLYNALGEKEKRFEIFKDNLRFIDEHNDYDVNRTYKLGLNRFADLTNEEYRAKFVGSRIDSNRRVGKLRSRSNRYAPRVGDKLPEFVDWRKEGAVVGVKDQGGCGSCWAFSAIAAVEGINKIVTGDLISLSEQELVDCDRSYNEGCNGGIMDYAFEFIIDNGGIDSEEDYPYKAVDGRCDQYRKNAKVVAIDGYEDVPTYDEKALQKAVANQPVAVAIEGGGREFQLYESGIFTGRCGTALDHGVNAVGYGTENGKDYWIVRNSWGPNWGENGYVRLERNLANSRAGKCGIAIEPSYPVKNGQNPPKPGPSPPTPVQPPSVCDNYYSCTASTTCCCIFEFGNSCFEWGCCPLDGATCCDDHYSCCPHEYPICNVNAGTCLRSKNNPFGVKALKRTPALLRASVGSENEVSSA* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0496 468 PANTHER CYSTEINE PROTEASE 29 384 - -
Lan3g0496 468 SUPERFAMILY Granulin repeat 375 409 - -
Lan3g0496 468 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Lan3g0496 468 Gene3D Cysteine proteinases 26 357 - -
Lan3g0496 468 Pfam Granulin 389 436 IPR000118 -
Lan3g0496 468 Gene3D Granulin 375 438 IPR037277 -
Lan3g0496 468 SMART GRAN_2 378 435 IPR000118 -
Lan3g0496 468 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Lan3g0496 468 SMART Inhibitor_I29_2 48 106 IPR013201 -
Lan3g0496 468 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Lan3g0496 468 Pfam Cathepsin propeptide inhibitor domain (I29) 48 106 IPR013201 -
Lan3g0496 468 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Lan3g0496 468 MobiDBLite consensus disorder prediction 352 371 - -
Lan3g0496 468 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 29 384 - -
Lan3g0496 468 SUPERFAMILY Cysteine proteinases 40 355 IPR038765 -
Lan3g0496 468 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Lan3g0496 468 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Lan3g0496 468 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
Lan3g0496 468 CDD Peptidase_C1A 140 354 IPR039417 -
Lan3g0496 468 MobiDBLite consensus disorder prediction 357 371 - -
Lan3g0496 468 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0496 Lan-Chr3 4597213 4601740 Dispersed/Wgd