Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0488 ATGCCCGACAAAGGAAACCGCGTGCTCCCCCATCGCAATGCAAAACAGAGAGCCGCAGCTGCTATTACGGGAACAGCCAAGAAGAAAAAGCGCGTCGCGTTAAGCGCCATCACTAACCTACCACCGGAGAAACCCGTTTCCGGTTCCGAACTAGGCGGTAATGACACCACCAAGAAGAGAAAGCGTGTCCCGTTAAGCGAACTCACTAACATTCCACCGGAGAAATCGGTTCCCGGTTCAGACACTGAGAACAACCGAGTCAGAAAAAGACCCACAAAATCAAAACCCGTGACTGAGTCCAATAATAATACATCGGATCCTCAATTGTGTGCGCCTTATATTTCTGATATTTACGAGTATCTTCGCAAAATGGAGGTGGATCCGAGTAAAAGACCCTTAGCGGATTATGTACAAAAAGTTCAGAGTGACATGAATGCGAATATGAGGGGTGTTTTGGTGGATTGGTTGGTGGAAGTTGCTGAAGAATATAACCTTGTTTCAGATACTCTGTTTTTTTCTGTTTCGTATATAGATAGGTTTTTGTCTCGCAATGCTTTATCCAGACAGAATCTGCAGTTACTTGGTGTTTCTTCCATGCTCCTTGCCTCAAAATATGAGGAAATTAAGCCACCTGAAGTAGAAAATTTTTGTTACATTACTGACAACACATACAACAAAGAAGAGGTTGTGGAGATGGAAGCTGATATATTGAAGACCTTGAATTTTGAATTGGGTGGACCTACAGTGAAGACATTTCTAAGAAGATTCTCTAAAGTGGGTCAAGAGAGTAATGATACTTCTAACCTGCAATTTGAGTTCCTCTGCTACTACCTAGCAGAGCTCAGTTTATTGGATTATAATTGTATAAAATTCTTTCCGTCTTTGGTTGCTGCATCTGTTGTATTTCTAGCCAGATTTATGTTAAGCCCAACGACACATCCTTGGAACTCTGCGCTTTATCAACTCACCAGATATGAACCTGCTGACTTGAAGGAATGTATTCTAAACATACACGACTTGTACCTCAGTAGGAGAGGAGCCACTTTAAAAGCTGTGAGAGAGAAATACAAGCAACATAAGTTCAAATGCGTGGCAAATACACCCTCGCCTCCGGAGATCCCGCTTTATTTTTTTGAGTTCAGAGTGGCAGACCTGAGGAAATTGTAA 1167 0.4242 MPDKGNRVLPHRNAKQRAAAAITGTAKKKKRVALSAITNLPPEKPVSGSELGGNDTTKKRKRVPLSELTNIPPEKSVPGSDTENNRVRKRPTKSKPVTESNNNTSDPQLCAPYISDIYEYLRKMEVDPSKRPLADYVQKVQSDMNANMRGVLVDWLVEVAEEYNLVSDTLFFSVSYIDRFLSRNALSRQNLQLLGVSSMLLASKYEEIKPPEVENFCYITDNTYNKEEVVEMEADILKTLNFELGGPTVKTFLRRFSKVGQESNDTSNLQFEFLCYYLAELSLLDYNCIKFFPSLVAASVVFLARFMLSPTTHPWNSALYQLTRYEPADLKECILNIHDLYLSRRGATLKAVREKYKQHKFKCVANTPSPPEIPLYFFEFRVADLRKL* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0488 388 CDD CYCLIN 247 338 IPR013763 -
Lan3g0488 388 PANTHER CYCLINS 48 381 IPR039361 -
Lan3g0488 388 SUPERFAMILY Cyclin-like 247 372 IPR036915 -
Lan3g0488 388 SMART Cyclin_C_2 247 370 IPR004367 -
Lan3g0488 388 MobiDBLite consensus disorder prediction 81 95 - -
Lan3g0488 388 SMART cyclin_7 251 339 IPR013763 -
Lan3g0488 388 SMART cyclin_7 154 238 IPR013763 -
Lan3g0488 388 CDD CYCLIN 148 237 IPR013763 -
Lan3g0488 388 SUPERFAMILY Cyclin-like 105 244 IPR036915 -
Lan3g0488 388 ProSitePatterns Cyclins signature. 149 180 IPR006671 -
Lan3g0488 388 PIRSF Cyclin_A_B_D_E 4 374 IPR039361 -
Lan3g0488 388 Pfam Cyclin, C-terminal domain 247 369 IPR004367 -
Lan3g0488 388 Gene3D - 116 366 - -
Lan3g0488 388 Pfam Cyclin, N-terminal domain 116 244 IPR006671 -
Lan3g0488 388 Gene3D - 132 245 - -
Lan3g0488 388 MobiDBLite consensus disorder prediction 1 108 - -
Lan3g0488 388 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 48 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0488 Lan-Chr3 4493693 4497590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0488 48 379 Core Cell Cycle Gene Families AT1G47230 56.686 2.57e-141 405