Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0477 ATGTTCAGAAACCAATACGACACCGACGTGACCACATGGAGCCCCGCCGGGAGGCTCTTCCAGGTAGAGTACGCAATGGAGGCGGTGAAGCAGGGCTCCGCCGCAATCGGTCTCCGATCCAAAACTCACGTGGTTCTCGCGTGCGTTAACAAAGCCAATTCCGAACTCTCTTCTCACCAGAAGAAGATCTTCAAGGTCGATGACCATATCGGCGTCGCCATCGCTGGACTCACCGCCGACGGCCGCGTCCTCAGTCGTTATATGCGGTCAGAGTGCATTAACTATTCATATACATATGAGTCACCGCTTCCAGTGGGTCGACTCGTTGTTCAACTCGCTGATAAGGCCCAGGTTTGCACCCAGCGGTCTTGGAAACGACCTTATGGGGTTGGTCTCTTGGTAGCTGGATTAGATGAATCAGGAGCTCACCTCTATTACAACTGTCCAAGCGGAAACTATTTTGAATATCAGGCTTTTGCAATCGGTTCTCGCTCACAAGCTGCAAAGACATATTTGGAACGCAAGTTTGATAACTTCAATGGCTCTTCAAGAGAAGATCTGATCAAAGATGCGCTTATTGCAACAAGGGAATCCTTGCAAGGTGAAAAACTCAGAAGTTCCGTATGCACTGTTGCTGTGGTTGGAGTTGGCGAGCCATTCCACATTTTGGATCAAGAAACTGTTCAAAAGTTTATTGATGAGTTTGAGATTGTGAGGGAGGAAGAAGTTCCTCCTGCTGAAGAACCTCAGCCAGAAGCTGAGCAGGGTGCTGCCGCAGATCAGGGTGCCGGTGCAGGTCAGGGTTCTGGTGCAGCCGATCAAGGTGGTGCTACAAGTGAAGGTGCTGCTCCAATGGACATTTGA 864 0.5023 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFDNFNGSSREDLIKDALIATRESLQGEKLRSSVCTVAVVGVGEPFHILDQETVQKFIDEFEIVREEEVPPAEEPQPEAEQGAAADQGAGAGQGSGAADQGGATSEGAAPMDI* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0477 287 MobiDBLite consensus disorder prediction 242 287 - -
Lan3g0477 287 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Lan3g0477 287 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Lan3g0477 287 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
Lan3g0477 287 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 265 - -
Lan3g0477 287 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Lan3g0477 287 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Lan3g0477 287 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Lan3g0477 287 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
Lan3g0477 287 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 265 - -
Lan3g0477 287 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0477 Lan-Chr3 4356165 4359894 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0434 5 9464171 9467370 Lan3g0477 3 4356165 4359894 LSH