Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0463 ATGTATCCAAACCAATCCTTTTCTTCTGGATCCTTTGTGGAGATGTTGTCTCAGACTCCCCTTTTACCTCATAGCTATAACGAATCCGTCGGACAAAACGAGTTGAAGTTTATCACAAGTATAGGTGACACGGTGACTATGCAGACTATTGATGAACATTCCAATGCTGAAATTAGTAATCCAGCAAGCAACTCTTTTGTTGGTTCTAGAGAATCCCATGTTGTTCCAAGGACACAATTTGATAGTGACCAAAATATACAGTGCCAGGGCTTGTCTCTTAGCCTCGGGACAGTGATGATGCCTCCTCCCTTTCATTACCAATATCCTGACAATGGTTTCTCCTCATTAATGACTTCTTCTCCTCCAAACGTAAAGGGGAATGCATCGGTTAACGATGACGTGGCCGGTCTTAAGGAATTGAGAAATGCTGAATGCATGGCATCTGTATCTTCTGGAGGATTTCACAACATTATCAAAAGGGAGGGTTTGTATCATCCAAACTCCTCAACCTGCCTCAGTGAAGGCCAGTCGGATTCATTCTTGCATGGATCACCAGGTTTTCCGAACACAGTTTTAAACTCTCAATACCTTAGGGCAGCACAGGAGTTGCTTGATGAAATTGTTAGTGTCCGAAAGGCTTTGAAGGAAACTGAATTGGAAAAACGACAAAGTTTCTGTGATATTGGGTTAGATGGAACCAAAGATGATGGAAAATCTACCTGTCAATCTATGCAAGTATCTTCAGTCCTTACTGGTTCTACTACAAACACTTCATCTGAGCTATCACCTGCAGAACGACAGAATTTGTTGGACAAGAAGACAAAACTTTTGTCCATGTTAGATGAGGTTGATAAAAGATATCGACAGTACTGCCATCAGATGCAGATTGTAGTGTCATCTTTTGATATGGTTACTGGATGTGGAGCAGCTGAACCATATACTGCACTTGCTTTGCGTACAATTTCTCGCCATTTTCGCTCTCTGCATGATGCCATTAGCGGCCAAATTCAAGTGATTCAAAGGAGTCTTGGAGAACAGGAGGGAATACCTCGTCTTCGCTATGTTGATCAGAAGCTTAGACAACAAAAGGCCCTTCAGCAGCTTGGTGTAATGCGACAAGATTGGAGGCCTCAGAGGGGACTTCCTGAAAGCTCTGTTTCAATACTCCGTGCATGGTTGTTTGAGCATTTCCTAAATCCTTATCCAAAGGATTCAGAGAAAATTATGCTTGCAAGACAAACAGGCTTGACCAGAAACCAGGTGGCAAATTGGTTCATTAATGCGAGAGTGCGTCTATGGAAGCCAATGATAGAAGACATATACAAAGAAGAATTTGGTGATGCTGAGATGATCAACAACAATCTTTCATCAGAAAATATTCCCAACAAAGCTCCAAAAGTTCAAGAGTCTGATAATAATAATAATATGAACAACAATGGTCCTTATTCAAGTGCACCTATCACAATAAAACAGAACAATGATGGTTGCAGCCTAATGGTTTCTACAACTCCTGCTACATATGATTTATCAGAGTTGGGTAACTTTTCTATGGGCAGCCACATGTCCCTTGCATTAGAGTTGAGGAACTGTGAAAGGAATGAATTTGGTGTGTCCAATGATGATATCCATAGAAGAAATAATGAGACATTGGTTTCTTCTTCTGAGACTGATTTGCTAGATTATCATTTCACAGACCCTGAAAACCAACAACACAAGTTTGGCAATCCTCATTTATTACATGAGTTTATTGTATGA 1755 0.4068 MYPNQSFSSGSFVEMLSQTPLLPHSYNESVGQNELKFITSIGDTVTMQTIDEHSNAEISNPASNSFVGSRESHVVPRTQFDSDQNIQCQGLSLSLGTVMMPPPFHYQYPDNGFSSLMTSSPPNVKGNASVNDDVAGLKELRNAECMASVSSGGFHNIIKREGLYHPNSSTCLSEGQSDSFLHGSPGFPNTVLNSQYLRAAQELLDEIVSVRKALKETELEKRQSFCDIGLDGTKDDGKSTCQSMQVSSVLTGSTTNTSSELSPAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVTGCGAAEPYTALALRTISRHFRSLHDAISGQIQVIQRSLGEQEGIPRLRYVDQKLRQQKALQQLGVMRQDWRPQRGLPESSVSILRAWLFEHFLNPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMIEDIYKEEFGDAEMINNNLSSENIPNKAPKVQESDNNNNMNNNGPYSSAPITIKQNNDGCSLMVSTTPATYDLSELGNFSMGSHMSLALELRNCERNEFGVSNDDIHRRNNETLVSSSETDLLDYHFTDPENQQHKFGNPHLLHEFIV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0463 584 Pfam Homeobox KN domain 392 431 IPR008422 GO:0003677|GO:0006355
Lan3g0463 584 Gene3D - 372 448 - -
Lan3g0463 584 Coils Coil 200 220 - -
Lan3g0463 584 CDD homeodomain 375 436 IPR001356 GO:0003677
Lan3g0463 584 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 24 531 - -
Lan3g0463 584 SMART prehox3 185 334 IPR006563 -
Lan3g0463 584 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 24 531 - -
Lan3g0463 584 ProSiteProfiles 'Homeobox' domain profile. 372 435 IPR001356 GO:0003677
Lan3g0463 584 SUPERFAMILY Homeodomain-like 376 440 IPR009057 -
Lan3g0463 584 SMART HOX_1 375 439 IPR001356 GO:0003677
Lan3g0463 584 Pfam Associated with HOX 191 333 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0463 Lan-Chr3 4215109 4219565 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan3g0463 POX 6.5e-48 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1256 3 24651934 24655317 Lan3g0463 3 4215109 4219565 PCT