Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0462 ATGGAAAACAACTCAGTTTCCAAGCTTCTAACACTGTACTTCTTCACTGTCCTTTTTTTGTATTCTAAGTTCATCCATTGCAATGTTACCTATGATAAGAAAGCCATTGTTATCAATGGCCAAAGGAGAATCCTCATATCTGGTTCCATTCACTATCCTAGAAGCACCCCTGAAATGTGGGAGGATCTAATTCAGAAAGCCAAAGATGGAGGCCTTGATGTTATTGATACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTAGCAATTACAATTTTGAAGGAAGATATGATTTGGTACGGTTCATTAAAACAGTGCAGAAAGTGGGGCTCTATGTGCATCTTCGCATTGGACCTTATGTTTGTGCTGAGTGGAATTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGACATAAGCTTCAGAACAGATAATGGTCCTTTTAAGGAAGCAATGGAAGGTTTCACTCAGAAAATTGTCAACATGATGAAAAATGAAAAGCTATTTCAATCTCAGGGTGGTCCAATTATTCTATCTCAGATTGAGAATGAGTTACAAAGCAAGGCTCGCGGCGCTGCTGTTCCTTCATACATGACTTGGGCTGCAAAGATGGCTGTTGGTTTGGGTACAGGAGTCCCCTGGGTGATGTGCAAGGAAGATGATGCCCCTGATCCGGTGATAAATACTTGTAATGGTTTTTACTGTGATTATTTCACTCCAAATAAACCATACAAGCCAAAACTGTGGACTGAGGCTTGGACTGGCTGGTTTACAGAATTTGGTGGCACAATTGTTCAGAGACCAGTTGAAGATCTAGCATTTGGAGTTGCTCGTTTCATACAAAAGGGTGGCTCATATTTCAATTATTACATGTACCATGGAGGAACTAATTTTGGAAGATCATCTGGAGGCCCATTTATTATTACAAGTTATGACTATGATGCTCCAATTGATGAATATGGTTTGCCCAGAGAACCTAAATATACTCATTTGAAGGACCTTCATAAAGCCATCAAACAATGTGAAAATGCTTTGATTTCTGCAGACCCTACTGTTACATCATTAGGAACCTATAAGGAGGCTCATGTTTTCTCTTCGGGAAATGGAACATGTGCAGCTTTTCTAGCAAACTATGGTTCAAATTCTTCTGCTAGAGTGACCTTCAATAACAGGCACTATGACTTGCCTCCTTGGTCCATAAGCATCCTCCCGGATTGCGTAACAGATGTATTTAACACTGCAAGAGTGAGAGTTGGAACATCACAAATACAAATGGTGCCTAGCAATTTGAAAATATTGTCATGGGAGACCTATAATGAAGATATATCTTCTCTCGAGGAAAATTCGAGGATAACAGGTTCTGGACTAATAGAACAGTTAAATGCTACTAGAGACACCAGTGACTATCTATGGTACACAACCAGTGTTGACATAAGTTCATCTGAATCGTTTCTTCGAGGAGGGCACAACAAGCCCGGCATTAGTGTGAATTCTGCAGGCGATGGCGTCCATGTGTTTATTAATGGACAATTTGTAGGCTCAGCTTTTAGGACAAGTAAACAGAAAAGCTTCACATTTAATGCCCCTGCAAACTTACGTGCTGGAACAAATAAAATAGCACTTCTCAGCGTAGCTGTTGGATTACCAAATGTTGGGTTCCATTTTGAAACATGGAAGACAGGGATCACTGGTCCAATTTTGATCAATGGTCTTGACCATGGACAGAAAGATTTGACAGGGCAGAAATGGTCATACCAGGTTGGCCTAAAAGGAGAAACTATGAATTTGGTGTCTCCAAATGGAGTTTCATCTGTTGATTGGACCATAGAGACACTAGCTATACAAAGCCAGCAACAATTGAAATGGCACAAGGCTTATTTCAATGCACCTGATGGAGTTGAGCCATTGGCATTGGACTTGACAAGTATGGGAAAGGGACAAGTATGGATCAATGGGCAAAACATAGGAAGATATTGGATGGTTTATGCTAAGGGTGCTTGTAATTCTTGCAACTATGCTGGGACATATAGATCTACAAAGTGCCAACTTGGTTGTGGAAAACCCTCTCAACAATGGTATCATGTTCCAAGGTCCTGGTTAAAGCCAACAAAGAACTTGATAGTAGTTTTTGAGGAACTGGGAGGGGATCCTTCGAAAATATCTCTTGTAAAGAGAACAGTACATACTGAAGCTACTAGTGAACCCAATTCAAAGAACTGA 2223 0.4035 MENNSVSKLLTLYFFTVLFLYSKFIHCNVTYDKKAIVINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPSNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPDISFRTDNGPFKEAMEGFTQKIVNMMKNEKLFQSQGGPIILSQIENELQSKARGAAVPSYMTWAAKMAVGLGTGVPWVMCKEDDAPDPVINTCNGFYCDYFTPNKPYKPKLWTEAWTGWFTEFGGTIVQRPVEDLAFGVARFIQKGGSYFNYYMYHGGTNFGRSSGGPFIITSYDYDAPIDEYGLPREPKYTHLKDLHKAIKQCENALISADPTVTSLGTYKEAHVFSSGNGTCAAFLANYGSNSSARVTFNNRHYDLPPWSISILPDCVTDVFNTARVRVGTSQIQMVPSNLKILSWETYNEDISSLEENSRITGSGLIEQLNATRDTSDYLWYTTSVDISSSESFLRGGHNKPGISVNSAGDGVHVFINGQFVGSAFRTSKQKSFTFNAPANLRAGTNKIALLSVAVGLPNVGFHFETWKTGITGPILINGLDHGQKDLTGQKWSYQVGLKGETMNLVSPNGVSSVDWTIETLAIQSQQQLKWHKAYFNAPDGVEPLALDLTSMGKGQVWINGQNIGRYWMVYAKGACNSCNYAGTYRSTKCQLGCGKPSQQWYHVPRSWLKPTKNLIVVFEELGGDPSKISLVKRTVHTEATSEPNSKN* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0462 740 Pfam Beta-sandwich domain in beta galactosidase 346 417 IPR041392 -
Lan3g0462 740 Gene3D - 426 582 - -
Lan3g0462 740 PANTHER BETA-GALACTOSIDASE RELATED 3 733 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 Gene3D Glycosidases 25 343 - -
Lan3g0462 740 SUPERFAMILY (Trans)glycosidases 28 343 IPR017853 -
Lan3g0462 740 PANTHER BETA-GALACTOSIDASE 3 733 - -
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Lan3g0462 740 SUPERFAMILY Galactose-binding domain-like 401 573 IPR008979 -
Lan3g0462 740 SUPERFAMILY Galactose-binding domain-like 583 730 IPR008979 -
Lan3g0462 740 Gene3D - 605 733 - -
Lan3g0462 740 Pfam Glycosyl hydrolases family 35 36 338 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0462 Lan-Chr3 4195539 4201458 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0550 10 4544833 4550389 Lan3g0462 3 4195539 4201458 LSH
Lan3g0462 3 4195539 4201458 Lan3g1258 3 24675537 24681262 PCT
Lan3g1258 3 24675537 24681262 Lan3g0462 3 4195539 4201458 PCT