Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0454 ATGGATGGAGGAGATGTTAGGATTGGGGCGAAGAAGAAGAAGAGATCGAAGACGGTGGAAATTGGTTTTGATTCGGATGATAATGAGACCATTGGCTCTATGTTTAAGCTAAGGAGGCCTAAGAAGAAGGTTAATTTGGCGCCAGAGGGGTCTTGTGGCGATGGAGGCAAGAATGGTAAGGGTGTTGCTGAGAAAGATTCAGTTGCTGATAACGAGGATTTGGGGGGTATGGATGATACCTTGGCTAGTTTCAGGAAGAGGTTGAAGGGTCCAAAGAGAGATCGGGGATCTGAAGCCAGTGGAGGAAGAAGTTCTGCTTTGAACGTGGGTCTGGTGTCATATTCTGATAGATCTTTGAATGTTTCTGTTGGGGGAATTGAGGGTCATGATCTGTCTGGTGATGATTTCGTTGCTCAGGAATCAAGGGGCACCTCGAAGGATGAGAAAGTGGTAGATATGTTGCATGGTGATGGCACACAGCACCCTTCTGATGAAAAAATGGAAGACTCCTTGTCAGTGATTATCCGAAAGGCGCAATCTAATCTGATTAAGAAATCGCGGGCCTCTTCAAGTTCAAAGAAGAAAAAAGGGAGTCAGAATGTAGATAATGACTTGAGACCTGGCTCTGAAAGTGTTCCTGAAACTGTAGATTCTGCGGGTGAATGTAAATCTAGATCTGCTCCTGCCTTGGAATCGGGTAAAAGAGATCTGACATTTGCTGGTGCTGTGTCTCAACCATCTGCTCTGGGTGAATTTTCTTCCATTTCTGATAAACAAAAGTATGCTGATGATTGTTTTCAAGAGGATACTGCTGAGGGCATTTGTGATATTCCAGATGAATCATTAGCTGATCACTCTCCCTCAACTAATGTCTGCAAAGGAGATAGGCAACAACTGTCTTGTGTGCAATCTGAAAATGTTTGTTTAAATCCGTGTTCTTCCAGGTTAGATGATGTTGAAATAATTCGTACTCTGCCTCTATCAAGAGCAGGGAAAGGGACACATGAATGTACTGAGAGTGAGTTCAAGAATAGATCGACTATTGAACTAGCACAAGTGTGTAATGATTCTTCAAAACACAGTATTTCTGCTTCTATGGAGAAAGAAAGTTCCTTACCTTCTCATGACACTGGATCCTTGATTAAATCGAGTGGAAGTATATTGATTGAGAATAATTTTACGGTTTCTGGAAACATTTTCCAGGAATCCTCAGACAATGAAGCTCTAAAGCTCTCTGGATTCTATGTGGAGGAAGATGGAGGTGTAAAATCTGAAAGTGAGTTTATATCTGGTAGAAGTTTCTGTGATTATAATAGTTCAGATGCAAAGGCTGAAGTGAAAGATTTTGCTTTAGGTTCTTCACTTGAAAAAAATGATATAATGGCTGGTGGTAGCTTATCTCCTATGATGTCTAATGAAGTCAGTGAATCTGAATTGGCTAATGAGTCAAATCACCCAGAGAAACCTTCAGAAATGTGTAATATTCCAAAAGACTCTACTCCTTCAGTTCTGGAATGCTTAGATCCAGTTCAATCCGATGGATCCTCCCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATGCAGAATTTCATGCCTCTCTGTCTGATTTTGCCAACAATGATGGTAAGATCTCAGTCATTTCACGTGCCGTGCGTAAGGCCAAAATGCATAAGCATGGAGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATGATCAATCTCTCCATGAAAGCCAAGTTTTTGCAGATGGTGACCACACTCTTAGAACAAGGGCGAAGCTTGATTCATCTTTTAATGTTGTCTATGACTCTGAAAGTGTTGCAGTAGCAGCAGTATCAGCTGGATTGAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCAGGGAATACTTGGATTGCAGAAATAAGATCTTAAGTCTTTGGAGCAGAGATGTTACACGGATTTTGCCTCTTGCTGAATGTGGTGTTAGTGATATCCATTCTGATGATGAAGGTCCCCGTTCTTTTCTCACTAGGGAAGTCTATGCATTTCTGGATCAATGTGGTTACATAAATGTTGGAATTGCCTCTCAGAAGGAGATTCTTGGAAATAGTGCAAGTGATTGCTGTAAACTTGTAGAAGAAAAAGGTCTTGAGGAAAGTTCCGCAGCTTTGGTGGCTGACTCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTGAAATGTCAGAGACTTCCATGGAGATTAACAAAAGTCTAACAACAGTGTATTACGAAGACCTGAAAACTGAAGCTGCAGAAGACAGAAGGCATGTTAATGCAGCAACGATGGCTATATCAAATATGAGACAACATGAAGAAAGAAAAAATTATGAATGCCAGGAAAATGGTGGGATTCAGGACAATTTAGTGAATTATACATGCAATTATTAATAACTCTATTCCTCTTAAATTTCTGATTGCAGATTGACTTTTATTGTACCTACAGGGCAAAGCAATGAATCCACTTGCATTAAATCTGCCGTAGGTGATCAGATAGGTGATCCTCTGCAGTCTGATTCAAAGGCTAGAAACAGAGTGATTATCATTGGAGCTGGTCCTGCAGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTCCTGTAATTGTACTTGAGGCTAGGAGTAGGATAGGAGGTCGTGTATTTACAGATCACTCATCTCTTTCTGTCCCAGTGGATCTTGGTGCTAGCATTATCACTGGTGTGGAGGCTGACGTGGCCACCGAGAGAAGACCAGATCCTTCCTCATTGGTTTGTGCTCAGTTGGGCCTTGAGTTGACAGTGCTAAACAGTGACTGTCCTCTTTACGATACAGTTACAGGACAAAAGGTTCCGGCCGATATGGATGAAGCACTTGAAGCTGAATACAATAGTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAGCAGGCGATGGGAATGTCTCTTGAAGATGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGCACGCTCTGGAAGTATTGGAGAAACTGAAAAACATAATTCTGGTTATACTCCATTTGATTCCGAAAGAGACTGTACTGTGAAAAAAAATATTGATGAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGCTGTGCTGCTTTGCTTACAGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTCTATGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCACTGTTGTTGAGTCTTTAGGAGAAGGGCTTGCAGTCCACTTGAACCATGTCGTAACAAATGTATCTTATGGCATCAATGAATCTGACCAGAATAATAAAGTCAAAGTTTCTACGTCAAATGGGAATGAATTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCGCCTTTGCCCTCGTGGAAATATTCTTCTGTTCAGCGTCTTGGCTTTGGTGTTCTCAATAAAGTCATTTTGGAATTTCCTTGTGTGTTTTGGGATGATGCTGTGGATTACTTTGGAGCAACATCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTTAGGAAAACAGTCGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAGAGCTTGAGCTCTTCTGATCATGTCAACCATGCATTGAAAGTTCTCCGTAAACTATTTGGGGAGGCTTCAGTACCTGATCCTGTTGGACATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCGTATGTTGCTATTGGAGCATCAGGAGAAGACTATGATATATTAGGGAGGCCAGTAGATAACTGCATGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCACCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTACGGGAGGCTGTTCGCATAATTGATATATTGAGCACTGGAAATGATTACACTGCAGAGGTGGAAGCAATGGAAGCTGCTTCGAGACAGTTAGATACTGAAAATGAAGTTAGGGATATAACAAAGAGACTAAACGCAGTAGAGCTTTCTAACTTATTCTACAAGAACTCTTTGGATGGTGCTCAAATCTTAACCCGGGAAGCTTTACTAAGGGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGGAGTAAAGAGGGGCTAGCTGTTCTCAACTCATGGATACTGGATTCAATGGGGAAGGACGGTACCCAACTCTTGCGGCACTGTGTGCGTCTTCTTGTGCGTGTTTCAACTGATCTACTTGCTGTACGCTTGTCAGGAATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTGCATGCTAGCCGTGATATTCGAGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGAAAAAAAAGCTTTTAATGGGGGTTTGAAGTTGTCAAGACAAGCAATTGCCTTAGATATATCAAAGAGAAAACATTTAAAAGATTCAGCCTCAGGAAGACCACCTCTGAGTACACATCCTGGTAGTCTTGATAATAGAGGAAAACAACAAGCAGCAATTGGCTCAAGGCATGAGGTCAGCTCTTCCAGGTCCCAAGGTTCAATTAGCAAAGTACTCACCGAGAAGGAGGATAACTGCTATGTTATTTCTGAAGAAGAACGGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCTCAAGCACATGCTGCTGCCGAGGCATATGCTGCGGCAGAAGCCAGGCGCAATAAGTTGTTACAGCTTCCAAAGATACCCTCATTCCAGAAATTCGCTTCAAAAAATGATGAGTGTGATAATAGAAAAAAGTGGTCTGGTGCTTTGGGAAGGCAAGATTGTATTTCAGAGATTGATTCGAGGAATTGCAGAGTTCGGGATTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGATAATTCTAGAATGCCAGTTGATAACCTTTCACAGAGAAGTCACTCAAATGAGATTGCCAGCCACTTGAATTTCAGAGAGAACTCAGGAGAAAGTGTTGCTGTGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGATGGCAATCTCAAGCAGCTGCAGCCGATTCTTATTTTTCTAATCCAAGCATAAGTTTGAAGGATGAGGAGGATTCAAATGGATGTTCAAGGTTACCCAGCTGGAAGCATGATGGTATGGCAAATGAAAGCTCAATTTCACAGGTTACTGTTAATAAGGAAGCCTTGAAAAGTCATCACTCCCGTGGAGCAGATCATATTAAACAGGCTGTTGTGGATTATGTTGGATCACTACTTATGCCCCTTTATAAAGCAAGGAAACTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATTGAGAAAGCCACAGATAAAGAAAAAGCCATGACTGTTGATGAGTTTCTAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGGCAATAAAACCAGATATGAAATCTTAA 5724 0.42 MDGGDVRIGAKKKKRSKTVEIGFDSDDNETIGSMFKLRRPKKKVNLAPEGSCGDGGKNGKGVAEKDSVADNEDLGGMDDTLASFRKRLKGPKRDRGSEASGGRSSALNVGLVSYSDRSLNVSVGGIEGHDLSGDDFVAQESRGTSKDEKVVDMLHGDGTQHPSDEKMEDSLSVIIRKAQSNLIKKSRASSSSKKKKGSQNVDNDLRPGSESVPETVDSAGECKSRSAPALESGKRDLTFAGAVSQPSALGEFSSISDKQKYADDCFQEDTAEGICDIPDESLADHSPSTNVCKGDRQQLSCVQSENVCLNPCSSRLDDVEIIRTLPLSRAGKGTHECTESEFKNRSTIELAQVCNDSSKHSISASMEKESSLPSHDTGSLIKSSGSILIENNFTVSGNIFQESSDNEALKLSGFYVEEDGGVKSESEFISGRSFCDYNSSDAKAEVKDFALGSSLEKNDIMAGGSLSPMMSNEVSESELANESNHPEKPSEMCNIPKDSTPSVLECLDPVQSDGSSLPSAIPDENENYAEFHASLSDFANNDGKISVISRAVRKAKMHKHGDMTYEGDADWEILINDQSLHESQVFADGDHTLRTRAKLDSSFNVVYDSESVAVAAVSAGLKAHAASPIEKIKFKEILKRKGGLREYLDCRNKILSLWSRDVTRILPLAECGVSDIHSDDEGPRSFLTREVYAFLDQCGYINVGIASQKEILGNSASDCCKLVEEKGLEESSAALVADSEDGVSFIVGQTEMSETSMEINKSLTTVYYEDLKTEAAEDRRHVNAATMAISNMRQHEERKNYECQENGGIQDNLVNYTCNY**LYSS*ISDCRLTFIVPTGQSNESTCIKSAVGDQIGDPLQSDSKARNRVIIIGAGPAGLTAARHLKRQGFPVIVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDTVTGQKVPADMDEALEAEYNSLLDDMELLVAQKGEQAMGMSLEDGLEYALKIRRMARSGSIGETEKHNSGYTPFDSERDCTVKKNIDEEILSPLERRVMDWHFAHLEYGCAALLTEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVVESLGEGLAVHLNHVVTNVSYGINESDQNNKVKVSTSNGNEFFGDAVLITVPLGCLKAETIQFSPPLPSWKYSSVQRLGFGVLNKVILEFPCVFWDDAVDYFGATSEERGKRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSSDHVNHALKVLRKLFGEASVPDPVGHVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPVDNCMFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSTGNDYTAEVEAMEAASRQLDTENEVRDITKRLNAVELSNLFYKNSLDGAQILTREALLREMFLNAKTNAGRLHVAKELLCLPVGNLKSFAGSKEGLAVLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHASRDIRAIASQLVNVWLEVFRKEKKAFNGGLKLSRQAIALDISKRKHLKDSASGRPPLSTHPGSLDNRGKQQAAIGSRHEVSSSRSQGSISKVLTEKEDNCYVISEEERAAIAAAEAARAQAHAAAEAYAAAEARRNKLLQLPKIPSFQKFASKNDECDNRKKWSGALGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFRENSGESVAVDSSIYTKAWIDTAGGVGIKDSDAIDRWQSQAAAADSYFSNPSISLKDEEDSNGCSRLPSWKHDGMANESSISQVTVNKEALKSHHSRGADHIKQAVVDYVGSLLMPLYKARKLDKDGYKAIMKKSATKVIEKATDKEKAMTVDEFLDFKRKTKIRSFVDTLIERHMAIKPDMKS* 1908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0454 1904 MobiDBLite consensus disorder prediction 1554 1586 - -
Lan3g0454 1904 Gene3D - 833 935 IPR036188 -
Lan3g0454 1904 MobiDBLite consensus disorder prediction 79 99 - -
Lan3g0454 1904 MobiDBLite consensus disorder prediction 133 172 - -
Lan3g0454 1904 SUPERFAMILY FAD/NAD(P)-binding domain 865 1347 IPR036188 -
Lan3g0454 1904 SUPERFAMILY Homeodomain-like 611 707 IPR009057 -
Lan3g0454 1904 ProSiteProfiles SWIRM domain profile. 612 712 IPR007526 GO:0005515
Lan3g0454 1904 SUPERFAMILY FAD-linked reductases, C-terminal domain 1183 1294 - -
Lan3g0454 1904 Pfam SWIRM domain 622 702 IPR007526 GO:0005515
Lan3g0454 1904 Pfam Flavin containing amine oxidoreductase 875 1345 IPR002937 GO:0016491
Lan3g0454 1904 Gene3D - 611 714 IPR036388 -
Lan3g0454 1904 MobiDBLite consensus disorder prediction 126 230 - -
Lan3g0454 1904 Gene3D - 1109 1296 - -
Lan3g0454 1904 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1442 1523 IPR035441 -
Lan3g0454 1904 PANTHER FLAVIN MONOAMINE OXIDASE 538 1900 - -
Lan3g0454 1904 MobiDBLite consensus disorder prediction 1544 1586 - -
Lan3g0454 1904 MobiDBLite consensus disorder prediction 40 109 - -
Lan3g0454 1904 Gene3D - 1297 1362 IPR036188 -
Lan3g0454 1904 Coils Coil 1612 1632 - -
Lan3g0454 1904 MobiDBLite consensus disorder prediction 469 491 - -
Lan3g0454 1904 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 538 1900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0454 Lan-Chr3 4095816 4105503 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Lan3g0454 Amino_oxidase 2.4e-104 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0540 10 4378084 4388894 Lan3g0454 3 4095816 4105503 LSH