Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0453 ATGATCAGCGTAGTTGATTCAATGGAAGGTGTTGATCAGAGAACTAGTTGTGCTACATTTGGTTCACCCTCTGGGGCAGTTCCTAGACCACCAAACCGGATGAATGCTGTCAATCAAATGGGAATTCCGCCTTCTCACCCGAATACTAATGTTTCGCCTTCGAGTTCAAGCCCTTATTCCCATATTATGGCCTCACAACCCCACATAGTGAGGTCTCTGAATTCGAGCCATGGGTCAGGGTCATCATCCCATTCTAGGTCTCTGTCTCAGCCCTCGTTTTTTTCTCTGGATTCCTTGCCCCCTTTGAGCCCTTCGCCCTATCAACCTTCTTCCGCTGCCACCTCATTTGTTGAATCGGTTTCGGCAAATGTGTCTATGGAGGAAAGATTGGGTAATGCAAATTCTGTGCCTGTTAACCGCGGTCATTCTGTTCAGCTTGGCCATAGTCTTCCCCCTCGTAAGGGGCACAGGCGCTCGAGTAGTGACTCACCTTTAGGAATCACTGATTACATTCAGTCTGTTCCTCAGTTTGTTTCATCTGGTGCTTGGAATGATCATGACAATTCTGTTTCGAGAGGAGAAGGCTTGGGTTCTGAGAAGAAGCCGGTTCAGTTAGTGTTGAAGGTACCGAATAAAGATGTGGATCGTGTTGATGGTTTTACTGGAGAAAAGAGGAGTGTGAGGAAAGAGGATTCACTGGATGTCTTATGTAGTTCATACATGAATTTGGACAACATTAACAATATGGGATTTTCTATGGAAGACAAGGATATGGATAGCAAAACTAGTGGCTCCAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGTCATATAAATGGTAAGCCAACTGGTGTTTGGGGGGCGAGCTCAAGTTGTTCGGAAGAACGAAAGGAAGGAGTGAAGAGGAGTTCGAATGGAGACATTGCACCCAGTGCCCGACACCGCAGAAGTTTCTCATTGGATAGTTCTATAGAAAACTTTCATATTGAAGATGGATCATCTAAGCTTCCTCCTTTGCAAAATCCAGTTGGTCAACACTCGCCTAGCAATTCAGTAGATGGTAAAGCATCTGAAACCACTGCGGAGTTTGGAAATGGCGAATTCAGCTCCGAGGAGCTAAAGAAAATAAGGGAGAATGATAAGCTTGCCGAAATTGCCATGTCTGATCCCAAGCGCGCAAAAAGAATTTTGGCTAACCGTCTATCTGCTGCACGTTCGAAAGAGCGGAAGACACGATACATTTCTGAATTGGAGCACAAGGTGCAAACCCTTCAGACAGAGATAACCACATTGTCTACTCAATTTACCAAATTACAGATGGATACTGCAGAGCTTAAAAGTCAGAATAACGAGTTCAAACTGAGGCTTCAAGCCATGGAACAACAGTCCAAACTGAAAGATGCTCTGAATGAGACTTTGGATGCCGAAGTTCGTCGCTTAAGGCGCACTGTTGCAGAACTCGGTGGGGAGTCCCTCCTCTCGAGTCGCATTGCTCAACAGCTTGCTATTAATCAACAAATGTTCCAGTTACAGCAGGCCAACCAGGTTAGACAATATCAACAACAAAACAACCATCCTCAGCAAGAGACACAGTCGCAGTCACAGCAAATTCAGTGTAACAATGAATTGCAATCCCAGCGCCAGAATGGCAAAACTACTGCCTACTAA 1671 0.4518 MISVVDSMEGVDQRTSCATFGSPSGAVPRPPNRMNAVNQMGIPPSHPNTNVSPSSSSPYSHIMASQPHIVRSLNSSHGSGSSSHSRSLSQPSFFSLDSLPPLSPSPYQPSSAATSFVESVSANVSMEERLGNANSVPVNRGHSVQLGHSLPPRKGHRRSSSDSPLGITDYIQSVPQFVSSGAWNDHDNSVSRGEGLGSEKKPVQLVLKVPNKDVDRVDGFTGEKRSVRKEDSLDVLCSSYMNLDNINNMGFSMEDKDMDSKTSGSKTVESSDNEVESHINGKPTGVWGASSSCSEERKEGVKRSSNGDIAPSARHRRSFSLDSSIENFHIEDGSSKLPPLQNPVGQHSPSNSVDGKASETTAEFGNGEFSSEELKKIRENDKLAEIAMSDPKRAKRILANRLSAARSKERKTRYISELEHKVQTLQTEITTLSTQFTKLQMDTAELKSQNNEFKLRLQAMEQQSKLKDALNETLDAEVRRLRRTVAELGGESLLSSRIAQQLAINQQMFQLQQANQVRQYQQQNNHPQQETQSQSQQIQCNNELQSQRQNGKTTAY* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0453 556 Coils Coil 443 463 - -
Lan3g0453 556 MobiDBLite consensus disorder prediction 521 556 - -
Lan3g0453 556 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 390 453 IPR004827 GO:0003700|GO:0006355
Lan3g0453 556 PANTHER BZIP TRANSCRIPTION FACTOR 72 556 - -
Lan3g0453 556 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 72 556 - -
Lan3g0453 556 MobiDBLite consensus disorder prediction 38 61 - -
Lan3g0453 556 SUPERFAMILY Leucine zipper domain 392 448 IPR046347 GO:0003700|GO:0006355
Lan3g0453 556 MobiDBLite consensus disorder prediction 72 91 - -
Lan3g0453 556 MobiDBLite consensus disorder prediction 256 359 - -
Lan3g0453 556 Gene3D - 391 444 - -
Lan3g0453 556 SMART brlzneu 388 452 IPR004827 GO:0003700|GO:0006355
Lan3g0453 556 MobiDBLite consensus disorder prediction 134 165 - -
Lan3g0453 556 Coils Coil 408 435 - -
Lan3g0453 556 Pfam bZIP transcription factor 392 450 IPR004827 GO:0003700|GO:0006355
Lan3g0453 556 MobiDBLite consensus disorder prediction 339 359 - -
Lan3g0453 556 CDD bZIP_plant_RF2 393 444 IPR044759 GO:0003700|GO:0006355
Lan3g0453 556 Coils Coil 471 491 - -
Lan3g0453 556 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0453 Lan-Chr3 4083625 4087735 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan3g0453 bZIP_1 1.7e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0537 10 4352914 4356469 Lan3g0453 3 4083625 4087735 LSH
Lan5g0443 5 9690934 9696030 Lan3g0453 3 4083625 4087735 LSH