Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0452 ATGGCGGAGGATAATTTAGATGAAGGATTGAAGAAGAAGCTCGAATACTTGTCCCTTGTATCAAAGGTTTGCACCGAGTTGGAATCTCACACCGGCACCGGCGACAAGGTCCTCGCCGAGTTCATAACCGAGTTAGGTCGGTCATCGGAAAACGTCGAAGAATTCGATGCGACTCTGAAAGAGAACGGTGCTGAAATGCCTGATTACTTCGTCCGAACGCTTCTCACCATAATTCACGCCATCCTTCCTCCCAACAAGTCCAAGAAGTCAGATGCTAAGAAAGAGAGTTCGGCGCCGACGACTAATACAAAGTTTAAGGCTCTGGCCATTGCTGATGATAGGGACCGTGTAAAGGAGCTTCAGAAGGAAATCGAAAACGAAACAGAAGCTGCGCGACAGAAAGGGAGAGAACGAGGAGAAGAGGAATATGGTTATGGAGATAGAGATAATAGAGATAGGCGCAGAGACAGGTATGAAAGAGAGGATAGACATAGAAGTAGGGATAGAGAAAGAGATGTTGATGAAGATGATAGAAGGGATGATTATAGGAGAAGGGGAAGGGACAGGGATAGGGATAGGGATAGAGATGTTGGTGAAGATGAAAGAAGGGATGATTACAGGAGAAGGGGAAGGGGTAGAGATAAGGATAGGGGCAGGGATAGATATGGCAGAGATGAAAGAGATGGCTATGAAGAAAATGAACGAGGAAGGGAGAACGGTGATGAGAATGGTGATAGGAAAGGTCGAAGAGATTCGAGGCATGGGGGTGGTGGTTCTAGTGAACCTGACTTGTATCAGGTTTATAAAGGGAGAGTGTCAAGGGTGATGGATACTGGGTGTTTTGTTCAGCTTGATGATTTTAGAGGGAAAGAGGGCTTGGTGCATGTTTCTCAGATTGCGACTCGGAGGATTACTAATGCTAAGGATGTGGTGAAGCGGGATCTGGAGGTTTATGTGAAGGTGATATCGGTTTCTGGTCAGAAATTGAGTCTTTCGATGAGGGATGTTGATCAGCATACTGGGAAGGATCTTCTTCCATTGAAGAAGAGCTCAGAGGATGATGTTTCTCGGATGAATCCACAGGATTCGAAGGATGGGCCGGTTGCCAGGACGGGACTTTCGGGAATCAGGATTGTGGAAGAGGATGATCTTGGTAAATCGCGTAGACCTTTGAAGAGGATGAGCTCTCCGGAGATATGGGAAGCAAAACAGTTGATTGCTTCTGGTGTTATGAGTGTTTCGGAGTACCCGACTTATGATGAGGAAGGAGATGGAATGCTGTACCAAGAGGAAGGTGCTGAGGAAGAGCTTGAGATTGAGATGAATGAGGATGAACCTGCCTTTTTGCAAGGGCAGAGTAGATATTCCATGGATATGTCTCCTGTTAAGATTTTTAAGAATCCAGAAGGTTCTTTGGGTCGTGCTGCTGCTCTCCAGTCTGCACTTATAAAGGAGCGTAGAGAGGTACGAGAACAACAACAACGCACAATGCTCGATTCAATTCCAAAGGATCTCAATCGTCCTTGGGAAGACCCTATGCCAGAGTCTGGTGAAAGGCATCTTGCCCAGGAGCTTAGGGGCGTTGGCTTATCAGCCTATGACATGCCAGAATGGAAGAAGGATGCTTATGGGAAAACCATTACTTTTGGGCAAAGATCAAAGCTTTCTATCCAGGAACAGAGGCAGAGTTTACCAATTTACAAGTTGAAAAAAGAATTGATTCAGGCAGTCCATGATAATCAGGTGTTGGTGGTCATTGGTGAAACGGGTTCGGGCAAGACTACTCAGGTCACGCAGTATCTCGCTGAAGCTGGTTACACAACAAGAGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCGGTTGCGAAGAGAGTGGCTGAAGAGTTCGGTTGTCGGTTGGGAGAGGAAGTTGGTTATGCCATTCGATTTGAGGATTGCACTGGACCGGATACTGTAATCAAGTACATGACAGATGGTATGCTTCTGAGAGAAATATTGGTTGATGAAAATCTGTCACAGTATTCTGTTATAATGCTTGATGAGGCCCACGAAAGAACTATTCATACCGATGTTCTGTTTGGGCTGCTGAAGCAGCTAGTGAAGCGTAGACCTGAAATGCGATTGATTGTGACTTCTGCTACTCTGGATGCTGAGAAATTCTCAGGATATTTCTTTAACTGTAACATTTTTACAATTCCTGGGAGGACTTTTCCGGTGGAGATTCTTTATACTAAACAACCAGAAAGTGATTACTTAGATGCATCTTTAATCACTGTCCTACAGATCCACTTGACAGAACCTGAAGGAGACATTCTTCTCTTCTTGACTGGTCAAGAGGAGATTGATTTTGCTTGCCAGTCTCTCTATGAGAGAATGAAGGGGTTAGGTAAGAATGTTCCTGAGTTGATCATTTTGCCTGTTTATAGTGCCCTTCCTAGTGAAATGCAATCGAGGATATTTGACCCTGCTCCTCCTGGGAAGAGGAAGGTGGTTGTGGCCACTAACATCGCTGAGGCTTCTTTGACTATTGATGGAATATTTTATGTGATTGATCCTGGATTCGCCAAGCAAAATGTTTATAATCCAAAGCAAGGTCTTGATTCTTTGGTGATAACTCCAATTTCACAAGCATCAGCCAAACAAAGAGCTGGACGTGCAGGGCGTACCGGACCTGGGAAATGTTATCGCCTCTATACTGAGAGTGCATATAGGAATGAGATGTCTCCTACTTCGATTCCGGAGATTCAAAGGATAAATCTCGGGACAACTACTCTTAATATGAAAGCTATGGGGATAAATGATCTTCTGTCTTTTGATTTTATGGACCCACCGTCACCTCAAGCTCTTATTTCTGCCATGGAACAACTTTACAGTCTTGGAGCATTGGATGAAGAGGGCCTTTTAACCAAGTTGGGGAGGAAAATGGCAGAATTTCCTCTGGATCCACCATTGTCCAAGATGCTGCTTGCCAGTGTGGACCTTGGATGCAGTGACGAGATTTTGACTATAATTGCCATGATTCAGACTGGCAATATATTTTACAGGCCTAGGGAAAAACAAGCCCAAGCAGATCAGAAAAGGGCAAAGTTTTTCCAGCCTGAGGGTGACCATCTCACACTGCTTGCTGTTTATGAGGCTTGGAAAGCTAAGAATTTTTCTGGGCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGATCGTTGAGAAGAGCACAGGATGTCAGGAAACAGCTTCTGACCATCATGGATAAGTATAAATTGGATGTTGTAAGTGCGGGTAAAAACTTCACCAAGATCAGGAAGGCTATCACTGCAGGATTCTTTTTCCATGCATCAAGAAAGGACCCTCAGGAAGGTTACAGAACCCTAGTTGAAAACCAGCCTGTATACATCCATCCAAGTTCTGCTTTGTTCCAGAGACAGCCAGACTGGGTCATCTATCATGAGCTTGTTATGACTACTAAGGAATACATGCGTGAGGTCACTGTCATAGACCCCAAATGGCTTGTTGAATTGGCTCCTAGATTCTTCAAAGTGGCAGATCCTACAAAGATGAGCAAGCGAAAGCGTCAAGAGCGTATAGAACCACTTTATGATAGATACCACGAGCCAAACTCATGGCGTTTGAGTAAACGTCGTGCATGA 3654 0.4475 MAEDNLDEGLKKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDATLKENGAEMPDYFVRTLLTIIHAILPPNKSKKSDAKKESSAPTTNTKFKALAIADDRDRVKELQKEIENETEAARQKGRERGEEEYGYGDRDNRDRRRDRYEREDRHRSRDRERDVDEDDRRDDYRRRGRDRDRDRDRDVGEDERRDDYRRRGRGRDKDRGRDRYGRDERDGYEENERGRENGDENGDRKGRRDSRHGGGGSSEPDLYQVYKGRVSRVMDTGCFVQLDDFRGKEGLVHVSQIATRRITNAKDVVKRDLEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDVSRMNPQDSKDGPVARTGLSGIRIVEEDDLGKSRRPLKRMSSPEIWEAKQLIASGVMSVSEYPTYDEEGDGMLYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPEMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHASRKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA* 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0452 1217 MobiDBLite consensus disorder prediction 85 109 - -
Lan3g0452 1217 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 679 688 IPR002464 -
Lan3g0452 1217 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 574 737 IPR014001 -
Lan3g0452 1217 Pfam Helicase associated domain (HA2) 956 1044 IPR007502 GO:0004386
Lan3g0452 1217 Pfam Helicase conserved C-terminal domain 764 894 IPR001650 -
Lan3g0452 1217 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 762 935 IPR001650 -
Lan3g0452 1217 Coils Coil 110 137 - -
Lan3g0452 1217 CDD SF2_C_RHA 741 902 - -
Lan3g0452 1217 ProSiteProfiles S1 domain profile. 265 334 IPR003029 GO:0003676
Lan3g0452 1217 SUPERFAMILY Nucleic acid-binding proteins 265 341 IPR012340 -
Lan3g0452 1217 MobiDBLite consensus disorder prediction 342 360 - -
Lan3g0452 1217 CDD DEXHc_DHX8 559 737 IPR044762 GO:0000398|GO:0003724|GO:0005524
Lan3g0452 1217 PANTHER ATP-DEPENDENT RNA HELICASE 88 1217 - -
Lan3g0452 1217 SMART S1_6 263 334 IPR022967 -
Lan3g0452 1217 PANTHER - 88 1217 - -
Lan3g0452 1217 CDD S1_DHX8_helicase 265 341 - -
Lan3g0452 1217 SMART ha2_5 955 1045 IPR007502 GO:0004386
Lan3g0452 1217 MobiDBLite consensus disorder prediction 123 257 - -
Lan3g0452 1217 Gene3D - 260 345 IPR012340 -
Lan3g0452 1217 Gene3D - 536 739 IPR027417 -
Lan3g0452 1217 MobiDBLite consensus disorder prediction 123 265 - -
Lan3g0452 1217 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 1102 1177 IPR011709 -
Lan3g0452 1217 SMART ultradead3 562 746 IPR014001 -
Lan3g0452 1217 MobiDBLite consensus disorder prediction 342 372 - -
Lan3g0452 1217 SMART helicmild6 790 894 IPR001650 -
Lan3g0452 1217 Gene3D - 939 1038 - -
Lan3g0452 1217 Gene3D - 740 914 IPR027417 -
Lan3g0452 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 554 1088 IPR027417 -
Lan3g0452 1217 Pfam DEAD/DEAH box helicase 570 720 IPR011545 GO:0003676|GO:0005524
Lan3g0452 1217 Pfam S1 RNA binding domain 266 332 IPR003029 GO:0003676
Lan3g0452 1217 Coils Coil 475 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0452 Lan-Chr3 4076168 4081670 Dispersed/Wgd