Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0451 ATGGTTTCCTTAGAAGAAAAGATTAAAACTGGAGGAGTTGTTGGGGGTCAAACTCTAGCTGCAGAAATGAAACTTTTGAAAGAAATGCAGGAACATTGTGGGGCTAGAAAGGCTTTAAATTCTGAGTTATGGCATGCTTGTGCAGGCCCTCTTGTATCTTTACCTCAGGAAGGGACTCTTGTGTATTACTTTCCTCAGGGACATATTGAGCAGGTGGCTGCTTCCACTAGAAAATCAACAACCTCACAGATACCAAACTATCCCAATCTTCCATCTCAGTTATTGTGCCAAGTTCAAAATGTCACACTTCATGCAGACAAAGAAACTGATGAAATTTATGCTCAAATGAGGCTCCAACCACTGAATTCTGAAAATGATGTATTTCCTGTATCTGATTTTGGGCTAAAGCATAGTAAACATCCCAGTGAGTTTTTCTGCAAAACCTTGACTGCTAGTGACACAAGCACACATGGTGGCTTTTCGGTTCCACGCAAGTCAGCAGAAAAGCTATTTCCTCCATTGGATTACAAAATGCAGCCCCCAAGCCAAGAACTTGTTGTCCGAGATTTGCATGATGCTACGTGGACATTTCGCCATATATATCGTGGTCAGCCAAAGAGGCACCTTCTCACAACAGGATGGAGTATATTTGTGGGCTCAAAAAGGCTTAGAGCTGGTGATTCTGTCATTTTTATCAGAGATGAAAAATCGCAATTGCGAATTGGTGTGAGGAGTGTTAATCGTCAACAGTCAACACTGCCATCATCAGTACTTTCTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCATGCTGCTGCTAATGGAAGTACATTCACTATTTTCTACAATCCGAGGGCATGCCCTTCGGAATTTGTTATTCCACTGGCTAAATACAGAAAAGCTGTATTTGGGACCCAGCTTTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATACATGGGTACAATAATTGGTGTAAGTGACTTGGATCCTTTAAGGTGGCCTGGTTCTAAGTGGCGTAATGTTCAGGTGGATTGGGATGAGCCAGGTTGTGGAGATAAGCAGAATAGAGTTAGTGTATGGGAGATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCAGGTCTAAAAAGGCCATCACAATCTGGATTTTTGGGAAATGAGTGGGGAAATTGGGTGAGAAGACCTTTTATGAGAGTTCCTGAAAATGGAACACATGAGCTCCCAAACTCAATATCAAATCTCTACTCAGAATACATGATGAGAATGCCATTTAATCCCCAACTTGTTAACAACAATAGTGCCTTTTTACGGGTCATGCAACACGAATCTGCTGCTACAAGATGTCTCTTAGAGGAGAATACAACACTCGCACAAGATAGCCAAAAAGTACATCCTAGTTCAGAAAGCATACCACTGAAAAATCTCCATTCTCAATCTGTCCCTGACCAATGTAATGCCTTAAACCTGCACTCAATGTCAAAAAGTGATCAACCTGATCAAATTCAGCCTCTTGCCAAAAATGATAATCATGATAATTCTGGAACAGTTTCTGATAAGCCAAAATTAGAATCTGAGGCGTTATCCGAAAACATGTTTGACATCCCTGCATATCCCGCTATACCGCAAAACCTTGCTAGCCATATGACATTCCTCAATCAAAACCAGAGTCCATTGCTCTCCCAATCCTGTGCATGGCCCATGCAACAACCTCAGTTAGAATCATCTACATCACATCCCCAACTGCTTGATATGCCTCAATCTGATCCTACTATTGTAAATGGAATGCTTCCTCAACTAGACATTGATGAATTCATGATGTATTCTTCCTGCCGACCTTTATCAGATTTGCACGAGCATACCGCACTTCAAAATCAGGCAGCGAATACGCCTTTACCTCCAATGAGCCAAGAAGTGTGGGATCATTATGTCATGAACTTCAATTTTTCATCACAGGCAGATCAGCTAACATCTATGTGCCCGTCAGGGCTGTATGGCCTAAACGGCATATCTAGTTCAACCAATATGAAGGATCTTTCAGCCGAGAGCAACAACCAAAGTGAAATTTGTGTCAATGTGAATGTTAGTAACAGTAAAAGTACCACGACTATGGTTGATCCTTCTACATCAAGTGCCATTTTGGACGAGTTTTGCACATTGAAAGACAAGGATTTTCAGAATCCACCAGATTGCATGGTGGGCAACTTAAGTTCCAGCCAGGATGTCCAGTCTCAGATAACCACAGCAAGCCTAGCAGAATCACAAGCCTTTAACTCTGGTGGTACATCGTTGAGCCACATTGATTTTGATCACAGCAGCTTTCTGCAGAATAATTCATGGCAACAAGTAGCTCCACCTATGCGAACCTACACAAAGGTGCAAAAGGCAGGTTCTGTAGGAAGATCAATTGATGTCACCACATTCAAAAACTATGAGGAGCTGATCTGCGCAATAGAGTGCATGTTTGGACTGGACGGTCTGCTGAATGACACCAGAGGTTCTGGATGGAAGTTGGTGTATGTGGATTACGAGAACGATGTTTTACTTGTTGGAGATGATCCATGGGAGGAATTTGTGGGGTGCGTCCGGTGCATAAGAATTCTATCACCTTCAGAAGTTCAGCAGATGAGTGAAGAAGGGATGAAGATTCTAAACAGTGGTGCCTTGCAAGGAATCAGTGGTTAG 2727 0.4246 MVSLEEKIKTGGVVGGQTLAAEMKLLKEMQEHCGARKALNSELWHACAGPLVSLPQEGTLVYYFPQGHIEQVAASTRKSTTSQIPNYPNLPSQLLCQVQNVTLHADKETDEIYAQMRLQPLNSENDVFPVSDFGLKHSKHPSEFFCKTLTASDTSTHGGFSVPRKSAEKLFPPLDYKMQPPSQELVVRDLHDATWTFRHIYRGQPKRHLLTTGWSIFVGSKRLRAGDSVIFIRDEKSQLRIGVRSVNRQQSTLPSSVLSADSMHIGVLAAAAHAAANGSTFTIFYNPRACPSEFVIPLAKYRKAVFGTQLSVGMRFGMMFETEESGKRRYMGTIIGVSDLDPLRWPGSKWRNVQVDWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSGLKRPSQSGFLGNEWGNWVRRPFMRVPENGTHELPNSISNLYSEYMMRMPFNPQLVNNNSAFLRVMQHESAATRCLLEENTTLAQDSQKVHPSSESIPLKNLHSQSVPDQCNALNLHSMSKSDQPDQIQPLAKNDNHDNSGTVSDKPKLESEALSENMFDIPAYPAIPQNLASHMTFLNQNQSPLLSQSCAWPMQQPQLESSTSHPQLLDMPQSDPTIVNGMLPQLDIDEFMMYSSCRPLSDLHEHTALQNQAANTPLPPMSQEVWDHYVMNFNFSSQADQLTSMCPSGLYGLNGISSSTNMKDLSAESNNQSEICVNVNVSNSKSTTTMVDPSTSSAILDEFCTLKDKDFQNPPDCMVGNLSSSQDVQSQITTASLAESQAFNSGGTSLSHIDFDHSSFLQNNSWQQVAPPMRTYTKVQKAGSVGRSIDVTTFKNYEELICAIECMFGLDGLLNDTRGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKILNSGALQGISG* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0451 908 Pfam B3 DNA binding domain 145 245 IPR003340 GO:0003677
Lan3g0451 908 CDD B3_DNA 144 245 IPR003340 GO:0003677
Lan3g0451 908 Pfam Auxin response factor 271 354 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan3g0451 908 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 906 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan3g0451 908 SMART B3_2 145 247 IPR003340 GO:0003677
Lan3g0451 908 MobiDBLite consensus disorder prediction 472 492 - -
Lan3g0451 908 ProSiteProfiles B3 DNA-binding domain profile. 145 247 IPR003340 GO:0003677
Lan3g0451 908 ProSiteProfiles PB1 domain profile. 802 886 IPR000270 GO:0005515
Lan3g0451 908 MobiDBLite consensus disorder prediction 508 526 - -
Lan3g0451 908 SUPERFAMILY DNA-binding pseudobarrel domain 134 274 IPR015300 -
Lan3g0451 908 MobiDBLite consensus disorder prediction 508 536 - -
Lan3g0451 908 MobiDBLite consensus disorder prediction 581 602 - -
Lan3g0451 908 Gene3D - 798 891 - -
Lan3g0451 908 SUPERFAMILY CAD & PB1 domains 803 881 - -
Lan3g0451 908 Pfam AUX/IAA family 800 889 IPR033389 -
Lan3g0451 908 PANTHER AUXIN RESPONSE FACTOR 5 26 906 - -
Lan3g0451 908 Gene3D - 309 381 - -
Lan3g0451 908 Gene3D - 143 246 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0451 Lan-Chr3 4069806 4075307 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan3g0451 AUX_IAA 2.4e-10 CL0072