Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0448 ATGGGAGTTCCAGCGTTTTATAGATGGCTAGCTGAAAAATATCCAATGGTGATTGTTGATGCGATCGAAGAGGAACCAGTGGTTATCGAAGGAACTCAGATTCCAGTTGATACGAGCAAGGAAAACCCTAACAACATTGAATATGATAATCTCTACCTCGACATGAATGGAATCATTCACCCTTGCTTTCATCCCGAAGATAGGCCATCTCCGACCTCATTTGATGAGGTGTTTGAGTGCATGTTTGACTACATTGACAGGCTATTTTGTATGGTGCGGCCTAGGAAGCTTCTCTATATGGCTATTGATGGTGTTGCACCAAGGGCTAAAATGAATCAACAGCGTTCTAGGCGGTTTAGAGCAGCAAAAGATGCATCTGATGCGGCTGAGGAAGAAGCAAGGTTAAGGGAGGAATTTGAGAGGGAGGGCAGAAGGCTTCCTCTCAAAGAAGAGTCACAGACTTTTGATTCAAATGTGATCACACCTGGAACTGAATTTATGGCTGTTTTGTCAGTTGCGCTTCAGTACTATGTTCATCTTAGGTTGAACAATGACCCTGGGTGGCAAAATATCAAGGTTATTCTTTCCGATGCAAATGTTCCTGGTGAAGGGGAGCATAAGATTATGTCCTATATTCGCCTGCAGAGAAATCTTAAAGGTTGTGATCCAAATACACGACACTGCCTGTATGGTTTGGATGCCGATTTGATTATGTTGGCTTTGGCTACCCATGAAGTCCATTTTTCAATTCTTAGAGAGATTGTTTTTACTCCTGGACAAGACAAATGCTTCCTTTGTGGCCAGATGGGTCATATGGCTGCAAACTGTGAAGGAAAGGCAAAACGTAAGGCAGGAGAGTTTGATGAAAAAGGAGATGCTATTGTGGCTAAAAAGCCCTTCCAGTTCCTGAACATTTGGACTTTGAGGGAATATCTGGAGCATGAAATGAGGATACCCAATCTTCCTTTTGAGTTTGAGTTTGAGCGCATTGTAGATGATTTTATCTTCATATGCTTTTTTGTTGGCAATGATTTCCTACCACATATGCCTACTCTAGAGATTCGTGAGGGTGCAATTAACTTGCTGATGGCAGTGTACAAGAAGGAACTTAAGGCATTGGGTGGTTACTTAACCGACGGGAGCAAGCCAAATTTGAGCATGGTGGAGCACTTTATTCAGGCTGTTGGATCTTATGAAGATAAAATATTTCAGAAAAGAGCTCGACTGCATCAGCGACAAGCAGAAAGAATAAAGCGTGACAAGTCACAAGCAAGAAGAGGAGATGATGCTGCGCCTCAGGCTCTGCCAGAGTCTGCAGTTGCAGTTTCACGATTCCATGGCTCTCGTCTTGCTTCAGCTCCAACACCTTCACCATATCAACAATCTGGGTATAAAAAACACAATAAAGAGGACTCTCAGGGGCCTCATAAAGTTGCTAGGTTAACTTCTTCAGGAGCAAGCGTTGCTGCTGCAATTGTTGAAGCCGAGAATAGTCTTGAAATAGATGTTCAAGATAACAAAGATGAATTGAAAGCAAAGCTGAAGGAGATACTTCGTGAGAAATCTGATGCATTCAACTCAAAAAATCCTGAAGAGGACAAGATTAAGTTGGGAGAACCAGGCTGGAAAGAGAGGTATTATGAGGAAAAATTTTATGCTAAAACTCCCGAGGAACGTGAAATGATACGGAAAGATGTTGTCTTGAAATACACCGAAGGCTTATGTTGGGTGATGCACTATTATTATGAAGGTGTTTGTTCTTGGAATTGGTTTTACCCTTACCATTATGCCCCGTTTGCGTCTGATCTGAAGGGCCTTGGTGAGCTTAATATTAGCTTTAATCTGGGTGCCCCATTCAAACCGTTTGACCAGCTTCTAGGGGTTTTTCCTGCCGCAAGTTCACATGCACTTCCTGAGCCATATAGGAAACTTATGACAGATCCAACCTCACCAATTATTGATTTTTATCCAATCGATTTTGAAGTGGACATGAATGGAAAACGATATGCTTGGCAGGGTATTGCAAAGTTGCCTTTTATTGACGAAACACGTCTTCTTTCAGAAGTCCGAAAAATTGAAAAATTGTTAACACCGGAGGAAAAACGAAGAAATGCTATAATGTTTGACTTGCTTTTTGTGAATTCTTGTCATCCTCTCTGTGTGTGCATAAGTACACTTGACAACAAATGTAGAAACATGTCAGACAGTGAACGCGCTGAGGTCAAGGAACGAATCAATCCAAATGAAAGTGGTGGAATGAATGGTTATCTATCCTTATGTGGTGGAGAACCTTGCCCTCCTATCTTTAGGTCTCCTGTTGCAAGCATGGAAGACATCACTGACAACCATGTCATATGTGCAATATATAGACTCCCAGATCTACATAAACACATTACCCAACCCCCACAAGGAGTTAAATTTCCTAAGAAGACTGTGACAATTGGGGATCTAAAGCCTGAACCTGTTTTATGGCATGAAGATTCAGGCAGGAGGCATTATCAAGAAAATGCTAGGCAAAACCCTCCTGGATCTATTTCCGGTCGGGAGCATGGAGAAGCAGCACACAGACTCATTGTCAATTCATTACAGGCGAAGGGTGGCACTAATGGATACCGCTATCCCAATAATGGGCCACCTCTATCTTATGCTGCACCAAGGGGTCATTCACAACCATTTCCGCCATATTATAATCATGAAGCACACCCAGGATATAGTGCAGTGTCACCGCTCCGAGGCCAACCACCGCATGCTGTTCCTGCCCCTCAGCAGTATGGTTATAATGAACCATACGTGCCAGCACCATCCACGTACAATCCTCATCTTCAATCAAATTCTTATGAAAGAAATAACCATCATATATCTCAACCTTATGAAAGAAATAATCATGGTGGTGGAGGAAATGCAAGGCATGGATATCATCAACCTTCAGGAAATTATCAGAACGCGAGGTTTTTGAATACGCCAGGTGCGTATGGTAGTCATCATCGTGAAGCTGGCCATCCCCAGCAAAACTTCCAATCAGCTAGAGCTCCTTACCAGAACTGGGCTCCTCGGAATAACTCGAATGGCCCCAGAGAATATGGTCAACATCCACCCAATCAATATTCTCTATCAGATAGAAGAGGTAATAACAGGAGGCCAATGCCACCACCTGGTTATAGTCCCAAATAA 3171 0.4276 MGVPAFYRWLAEKYPMVIVDAIEEEPVVIEGTQIPVDTSKENPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFECMFDYIDRLFCMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDASDAAEEEARLREEFEREGRRLPLKEESQTFDSNVITPGTEFMAVLSVALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGCDPNTRHCLYGLDADLIMLALATHEVHFSILREIVFTPGQDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGDAIVAKKPFQFLNIWTLREYLEHEMRIPNLPFEFEFERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYKKELKALGGYLTDGSKPNLSMVEHFIQAVGSYEDKIFQKRARLHQRQAERIKRDKSQARRGDDAAPQALPESAVAVSRFHGSRLASAPTPSPYQQSGYKKHNKEDSQGPHKVARLTSSGASVAAAIVEAENSLEIDVQDNKDELKAKLKEILREKSDAFNSKNPEEDKIKLGEPGWKERYYEEKFYAKTPEEREMIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELNISFNLGAPFKPFDQLLGVFPAASSHALPEPYRKLMTDPTSPIIDFYPIDFEVDMNGKRYAWQGIAKLPFIDETRLLSEVRKIEKLLTPEEKRRNAIMFDLLFVNSCHPLCVCISTLDNKCRNMSDSERAEVKERINPNESGGMNGYLSLCGGEPCPPIFRSPVASMEDITDNHVICAIYRLPDLHKHITQPPQGVKFPKKTVTIGDLKPEPVLWHEDSGRRHYQENARQNPPGSISGREHGEAAHRLIVNSLQAKGGTNGYRYPNNGPPLSYAAPRGHSQPFPPYYNHEAHPGYSAVSPLRGQPPHAVPAPQQYGYNEPYVPAPSTYNPHLQSNSYERNNHHISQPYERNNHGGGGNARHGYHQPSGNYQNARFLNTPGAYGSHHREAGHPQQNFQSARAPYQNWAPRNNSNGPREYGQHPPNQYSLSDRRGNNRRPMPPPGYSPK* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0448 1056 MobiDBLite consensus disorder prediction 829 848 - -
Lan3g0448 1056 MobiDBLite consensus disorder prediction 413 436 - -
Lan3g0448 1056 MobiDBLite consensus disorder prediction 999 1041 - -
Lan3g0448 1056 SUPERFAMILY Retrovirus zinc finger-like domains 258 283 IPR036875 GO:0003676|GO:0008270
Lan3g0448 1056 MobiDBLite consensus disorder prediction 936 961 - -
Lan3g0448 1056 Pfam Zinc knuckle 262 276 IPR001878 GO:0003676|GO:0008270
Lan3g0448 1056 Gene3D - 609 706 - -
Lan3g0448 1056 Coils Coil 122 142 - -
Lan3g0448 1056 Coils Coil 500 527 - -
Lan3g0448 1056 CDD PIN_XRN1-2-like 51 312 - -
Lan3g0448 1056 MobiDBLite consensus disorder prediction 449 477 - -
Lan3g0448 1056 PIRSF Exonuclease_Xrn2 1 1037 IPR017151 GO:0004534|GO:0005634|GO:0006139
Lan3g0448 1056 ProSiteProfiles Zinc finger CCHC-type profile. 262 276 IPR001878 GO:0003676|GO:0008270
Lan3g0448 1056 Pfam Xrn1 helical domain 325 816 IPR041412 -
Lan3g0448 1056 PANTHER 5'-3' EXORIBONUCLEASE 1 1035 - -
Lan3g0448 1056 Gene3D - 1 134 - -
Lan3g0448 1056 Gene3D - 151 391 - -
Lan3g0448 1056 Pfam XRN 5'-3' exonuclease N-terminus 1 253 IPR004859 GO:0003676|GO:0004527
Lan3g0448 1056 MobiDBLite consensus disorder prediction 413 427 - -
Lan3g0448 1056 MobiDBLite consensus disorder prediction 911 1056 - -
Lan3g0448 1056 PANTHER 5'->3' EXORIBONUCLEASE 1 1035 IPR027073 -
Lan3g0448 1056 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Lan3g0448 1056 MobiDBLite consensus disorder prediction 973 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0448 Lan-Chr3 3976466 3985706 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0448 5 9801722 9812818 Lan3g0448 3 3976466 3985706 LSH