Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0266 ATGAAATCTCAACAAAACATGGATACACCAAAGCTAAACCTAGATAAGCTGAAAGCAGTGAAAGTATTAGGCAAAGGTGCCATGGGCACCGTAATCCTCGTCCAAGACACCACCACCATCACCACCACCGCCACCACCACCACCACCACCACCACCCTTATAGCACTAAAGGTCTTTGACAAAACATTCACTCACACGCACCACCACGCTGACCGTCGTGCCCGTTGGGAAATCCAAGTCCTTTCTCGCTTGTCTCACCCTTTCTTACCTTCCCTTTTGGGCACCTTTGAAAACGACCAGTTCTTAGGGTGGGCCTTACCTTACTGTCCCGGCGGCGACCTCCACCACCTCCGTCACCAACAAACTGATCACGTTTTTTCACCCACCGTCATCAAATTTTACCTCGCTGAGATTCTCTGTGCTCTTGACCACCTTCATTCCATGGGCATCGCATACCGTGATTTAAAACCCGAAAATGTCCTCATTAACTGTTTCGGACACGTCACCCTCACTGATTTCGATCTATCTCGTAATCTCTCTCGAGATACAAAACCCATTGTACCCCTCGGGGACGAAGATAGTTATCTCAAACACTCTCTTAGTAGTGAGACTAATAAGTTCTCGAAATCCAACTCACCTAAACTTAATAGAGTTAAACATTCTCGGTGGACCCCACAGGTAAAGGAAAAGAAAGCTAACTCGGCGCGAGTCAACCCGGTGACTCGGCGGAAGAACGGCGAGAGATCCAACTCGTTCGTCGGAACTGAAGAATACGTCTCGCCGGAGGTAGTTTCCGGCGAGGGACATGAATTCGCGGTGGATTGGTGGGCCCTTGGGGTATTAAGCTACGAGATGTTGTACGGTACGACGCCGTTTAAGGGGAAGAATAAGAAGGAAACTTATCGAAACGTTCTTTTTAAGGAGCCAGAGTTTGTAGGGAAGAAAACGGCGTTAACGGATTTGATTGAACGGTTGTTGGAAAAGGAACCTGTGAAACGGTTGGGTTACGTACGAGGTGGTAGTGAGATTAAGGAGCATGAGTTTTTCAAAGGGGTTAAGTGGGACCTACTCACGGAGGTTGTGCGGCCACCGTTTATTCCGTCAAGAGACGGCGATGTAGACGGTGTTGGACAGGATATAAGGGAGTATTTTCAGAAGTTGAAATCGCCGCCGTTAACGTCACCGGAGTCTCAGAATGTTTCATTTGCTGAATTCTGA 1218 0.4819 MKSQQNMDTPKLNLDKLKAVKVLGKGAMGTVILVQDTTTITTTATTTTTTTTLIALKVFDKTFTHTHHHADRRARWEIQVLSRLSHPFLPSLLGTFENDQFLGWALPYCPGGDLHHLRHQQTDHVFSPTVIKFYLAEILCALDHLHSMGIAYRDLKPENVLINCFGHVTLTDFDLSRNLSRDTKPIVPLGDEDSYLKHSLSSETNKFSKSNSPKLNRVKHSRWTPQVKEKKANSARVNPVTRRKNGERSNSFVGTEEYVSPEVVSGEGHEFAVDWWALGVLSYEMLYGTTPFKGKNKKETYRNVLFKEPEFVGKKTALTDLIERLLEKEPVKRLGYVRGGSEIKEHEFFKGVKWDLLTEVVRPPFIPSRDGDVDGVGQDIREYFQKLKSPPLTSPESQNVSFAEF* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0266 405 ProSiteProfiles Protein kinase domain profile. 17 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0266 405 MobiDBLite consensus disorder prediction 224 249 - -
Lan3g0266 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Lan3g0266 405 Pfam Protein kinase domain 244 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0266 405 Pfam Protein kinase domain 20 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0266 405 Gene3D Phosphorylase Kinase; domain 1 17 112 - -
Lan3g0266 405 Gene3D Transferase(Phosphotransferase) domain 1 246 368 - -
Lan3g0266 405 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 12 392 - -
Lan3g0266 405 SMART serkin_6 17 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0266 405 ProSiteProfiles AGC-kinase C-terminal domain profile. 350 405 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan3g0266 405 Gene3D Transferase(Phosphotransferase) domain 1 113 184 - -
Lan3g0266 405 SUPERFAMILY Protein kinase-like (PK-like) 14 384 IPR011009 -
Lan3g0266 405 PANTHER FLIPPASE KINASE 1-RELATED 12 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0266 Lan-Chr3 1772991 1781111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0266 12 405 AGC Kinase Gene Family AT1G51170 57.421 2.01e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan3g0266 Pkinase 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0266 - K08286 cit:102617617 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0266 3 1772991 1781111 Lan13g0294 13 1907546 1909008 PCT
Lan13g0294 13 1907546 1909008 Lan3g0266 3 1772991 1781111 PCT