Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0263 ATGGGAGAAATCGAAGAAATTGGACCTGATGTTTGTTCGGATATAGAAATGGATGACATTAGAGTTCAAAATATAGCTGATAAAGATGTCAGCGATGAAGAAATTGAAGCGGAAGATTTGGAGAGGCGTATGTGGAAGGATAGTATCAAGCTCAAAAGGCTGAAGGAAAAACAGAAGCTAGAAGCACAGAGGGCCGCAGAGAAGCAGAAGACCAGGCCGACAACTGATCAAGCTCGTAGGAAGAAAATGTCCAGAGCACAAGATGGGATTCTTAAGTATATGCTCAAGCTTATGGAAGTCTGCAAAGCTCGTGGGTTTGTTTATGGGATCATTCCTGAGAAGGGCAAGCCGGTTAGTGGTTCCTCCGATAACATCAGAGCTTGGTGGAAAGAGAAGGTGAAGTTTGATAAGAATGGCCCTGCAGCCATAGCCAAGTATGAAGCAGAGTGTCTTGCTATGAGTGAGGCTGATAATAACCGAAGTGGGAACTCTCCGAGCATTCTCCAAGACCTGCAAGATGCAACACTTGGGTCACTCTTGTCTTCTTTGATGCAACATTGCGATCCTCCTCAGAGGAAGTATCCACTGGAAAAGGGTGTCCCCCCTCCATGGTGGCCAACCGGGAACGAAGATTGGTGGGTACAATTGAACTTACCTCATGGTCAGAGTCCTCCTTATAAGAAGCCGCATGATTTAAAGAAGATGTGGAAAGTGGGAGTGTTAACTGCTGTTATAAAGCACATGTCACCTAATATTGCAAAAATTAGGAGACATGTGCGCCGGTCAAAATGCTTGCAAGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGAGTTTTAAGTCGAGAAGAAGCTCTCAATAGTCAGCCTAGTAGTGATAATGGTGCATCTGGAGTAACGGAAACGCCTCCCAGTGTTCAAGCTAAAAATAAGCAAGCTGCTGCTAGTAGTGGTAGCAACTATGATGTTGATAGCACTGATGATGGTGTTGGCTCTGTTTCTTCTAAGGAAAATATGAGAAATCAGTCTGCGGAGACTGAACCATCAGATAACTTGCGCAAGAATCTTATCCTAGATAAAGATCTTGGTCAGAAGCAGACCCGGAAAAAGAGACCGCGGTTGAGGTCAGGCACCAGTAAGAAACGACCAGCACAATGTGACAATGAAATCTTACATGCTGAGCCAACAAGCGATTTGCTCAATATGAACCAGACAGAAGCACAGGTAGTTGAACTTCAAATTCATGGAGATGAACTGAGCAATGAGACGGATTCTGCTTTGAGACCACTGAAAAAAGGACTTGAGGTGCCAACTCAACTACCAGCACCTGAATTTGACCATTTCTCTTATCTCCAATCAAACAACTCAATCCCCTCAGAAAGCATGTATGTGGATGGAAGGCCACCATTGCACTATCCTGAGGTGCAAAACCCTGGCTTGTACCATGACACTACTTATAATCTTTTTAATCCAGTGGCGGGATATGGGCCGAGTCATGATGTGCCACAGTTGCAGCCTGGAAATAGTGAACTCATTAAGCCGGAGAATGACACAGTTTCTATAGCACCATTACATATGAGAGGGGATGAAGTTACTGGAGCAGACTTGCAATATTTTGGTAAAGACACATTTCCAAATGAGCTTGATAGACCTATAGATCACTCTTTCTTTGGATCACCACTCAATAGTATGACATTAGATTTTGGACTCAACAGTCCACCATTCAACATAGATGATTTCTTGGGTGAAGATGAAATGATTCAATACTTCGGAGCTTAG 1782 0.4371 MGEIEEIGPDVCSDIEMDDIRVQNIADKDVSDEEIEAEDLERRMWKDSIKLKRLKEKQKLEAQRAAEKQKTRPTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNNRSGNSPSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWVQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRRSKCLQDKMTAKESAIWLGVLSREEALNSQPSSDNGASGVTETPPSVQAKNKQAAASSGSNYDVDSTDDGVGSVSSKENMRNQSAETEPSDNLRKNLILDKDLGQKQTRKKRPRLRSGTSKKRPAQCDNEILHAEPTSDLLNMNQTEAQVVELQIHGDELSNETDSALRPLKKGLEVPTQLPAPEFDHFSYLQSNNSIPSESMYVDGRPPLHYPEVQNPGLYHDTTYNLFNPVAGYGPSHDVPQLQPGNSELIKPENDTVSIAPLHMRGDEVTGADLQYFGKDTFPNELDRPIDHSFFGSPLNSMTLDFGLNSPPFNIDDFLGEDEMIQYFGA* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0263 593 MobiDBLite consensus disorder prediction 287 389 - -
Lan3g0263 593 Coils Coil 403 423 - -
Lan3g0263 593 Coils Coil 23 57 - -
Lan3g0263 593 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Lan3g0263 593 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 579 IPR006957 GO:0005634
Lan3g0263 593 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 11 579 - -
Lan3g0263 593 MobiDBLite consensus disorder prediction 287 351 - -
Lan3g0263 593 SUPERFAMILY DNA-binding domain of EIN3-like 166 287 IPR023278 GO:0003700|GO:0005634
Lan3g0263 593 MobiDBLite consensus disorder prediction 60 83 - -
Lan3g0263 593 MobiDBLite consensus disorder prediction 353 367 - -
Lan3g0263 593 Gene3D - 73 148 IPR023278 GO:0003700|GO:0005634
Lan3g0263 593 Gene3D - 158 296 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0263 Lan-Chr3 1753268 1756086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0263 16 559 EIL Transcription Factor Family AT1G73730 54.919 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lan3g0263 EIN3 2.7e-126 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2184 6 32221827 32224806 Lan3g0263 3 1753268 1756086 LSH
Lan10g0328 10 2193067 2196246 Lan3g0263 3 1753268 1756086 LSH