Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0219 ATGCAAGACTCAACATTATTTCAACCTATGAAACCCCAATTTCCTGAACAAGAACAACTAAAGTGCCCACGTTGTGATTCCACAAACACTAAATTCTGCTACTACAACAACTACAATCTTTCGCAGCCACGCCATTTTTGCAAGAATTGTAGAAGGTATTGGACTAAAGGAGGTTCCTTGAGAAACATTCCTGTTGGTGGTGGAACTAGAAAGAACACAAAACGTTCATCCACCAATTCCAAACGTGCTGCATCATCATCACAATCACCATCACCATCAGTTTCCTCAGTTTCAATTACACCTCAGGTGTCAGCAGCAGCAGCTACAGAAATTGAGCCGAATCGAAACGATCCGACGATACAGGCTTACTCAATTGGAGGGAGTTTCAGTTCACTTCTTGCATCAGCTGACAATTTAGGGAGCCTATTGGAGGGTTTGAATTCAAGTGGATCAAATATGAAAATGGTGCAAATGAATGAATATGGAAGCTCTGGCCCAATGATGAATTTGGATCCGGGTAGGAATAATGGCGGGTCGGGTGTGCAGGGTAGTGGCAATGCTGCAGAGAGCTTTATGAGTATGCAAAATGGTGATTCAAGTTGTTGGAATGGTAGCAGCAATGGTTGGTCTAACCTTGCAATATACACACCAGGGTCAACTTTTCAGTAG 669 0.429 MQDSTLFQPMKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGSLRNIPVGGGTRKNTKRSSTNSKRAASSSQSPSPSVSSVSITPQVSAAAATEIEPNRNDPTIQAYSIGGSFSSLLASADNLGSLLEGLNSSGSNMKMVQMNEYGSSGPMMNLDPGRNNGGSGVQGSGNAAESFMSMQNGDSSCWNGSSNGWSNLAIYTPGSTFQ* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0219 222 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Lan3g0219 222 MobiDBLite consensus disorder prediction 69 98 - -
Lan3g0219 222 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 3 222 - -
Lan3g0219 222 MobiDBLite consensus disorder prediction 61 98 - -
Lan3g0219 222 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Lan3g0219 222 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 222 IPR045174 GO:0003700|GO:0006355
Lan3g0219 222 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0219 Lan-Chr3 1410096 1412032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0219 11 143 C2C2-Dof Transcription Factor Family AT1G51700 55.172 2.58e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan3g0219 zf-Dof 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0219 - - adu:107458974 264.618