Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0073 ATGAATATTCAGACACTTGAGAAGATGTTAACCAGCTCAAATTCACAGCAAGAGAGAAAGCCAAGATCTGAGCCAGAACATGCACTGAAATGCCCAAGATGTGACTCCACCAACACCAAATTCTGTTACTACAACAACTACAGTCTTTCTCAACCAAGGTATTTCTGCAAATCATGCAAGAGATATTGGACCAAAGGAGGAACACTAAGGAATGTTCCAGTTGGTGGTGGATGTAGAAAAGCAAAGAGGTCTTCATCAAAGAAACCTCAAGATCAAACATTCATCATACCCAATGATCTTAACTCACTCAAAACCTTTCCTCATTTGACCTATGAGTACTCTAGTGATACCCTCACACTAGGGTTTCAAAAACAGTCATTGGAGCATTTGGGTTTTCACAACCATGATCTTTCAATCTTAGGGAACCCAACAAACTCACTTTGTGACATGAACCCTACTTCAACAAAAAATAATGGATTATTGGAAAGTCATAGAAGTGGGTTCCTTGGAACACAGAAAATAAATGATCAGAATATGTATTATGTGTATGGTAATGGGGACATGGTGGAGGTAGATAATGGTAAAAGTGGAATGATGATGCTACCTTATGATGAAGCAATGAGGGTAAGTGGAAATAGGGTATTGGGGGGTTTTCCATGGGAACTTAGTGGAGACACAAACATGGGTGAAGTTGATTCAGGAATAACAAGTTGGAATGGTTTAACTTCATCTTGGCATGGCATTCTCCATAGTCCCTTAATATAA 765 0.3908 MNIQTLEKMLTSSNSQQERKPRSEPEHALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCKRYWTKGGTLRNVPVGGGCRKAKRSSSKKPQDQTFIIPNDLNSLKTFPHLTYEYSSDTLTLGFQKQSLEHLGFHNHDLSILGNPTNSLCDMNPTSTKNNGLLESHRSGFLGTQKINDQNMYYVYGNGDMVEVDNGKSGMMMLPYDEAMRVSGNRVLGGFPWELSGDTNMGEVDSGITSWNGLTSSWHGILHSPLI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0073 254 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Lan3g0073 254 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 1 253 - -
Lan3g0073 254 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
Lan3g0073 254 MobiDBLite consensus disorder prediction 1 28 - -
Lan3g0073 254 MobiDBLite consensus disorder prediction 1 18 - -
Lan3g0073 254 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Lan3g0073 254 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 253 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0073 Lan-Chr3 496569 497382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0073 27 254 C2C2-Dof Transcription Factor Family AT2G28510 41.365 2.10e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan3g0073 zf-Dof 5.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0073 - - lang:109342737 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0120 10 740918 743400 Lan3g0073 3 496569 497382 LSH
Lan3g0073 3 496569 497382 Lan7g0274 7 1758975 1760701 PCT
Lan3g0073 3 496569 497382 Lan8g1688 8 23767509 23769193 PCT
Lan3g0073 3 496569 497382 Lan13g0362 13 2422755 2424488 PCT
Lan7g0274 7 1758975 1760701 Lan3g0073 3 496569 497382 PCT
Lan8g1688 8 23767509 23769193 Lan3g0073 3 496569 497382 PCT
Lan13g0362 13 2422755 2424488 Lan3g0073 3 496569 497382 PCT