Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0748 ATGGCTTCTTCAGAAGATGTGAAGAGTGGCGAATCAGCTGTTACAACGATCGTGAATCTCGCTGAAGAAGCCAAGCTTGCGAGAGAAGGCGTTGTTAATAAGGCTCCTAGCTATGCTGTTGCCAGCATCTGCAAGTCTCTTGTTGCTGGTGGAGTCGCTGGAGGAGTATCACGAACAGCAGTTGCTCCACTGGAACGGATGAAAATTTTGCTCCAGGTCCAGAATCCTCATAACATAAAATACAATGGAACAATCCAAGGCCTGAAATATATATGGAGAAATGAAGGGCTGCGTGGACTGTTCAAAGGGAATGGTACTAACTGTGCTCGAATTATCCCAAATTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAAGGCATATTGTATCTGTATCAGCAGCAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTTTTGCGTCTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCAACCTATCCAATGGATATGGTTCGCGGCAGGATAACTGTACAGACTGAGAAATCACCTTATCAGTACAGAGGAATGTTCCATGCTTTGTCTACTGTGCTTAGGGAAGAAGGACCTCACGCTTTATATAAGGGCTGGCTTCCTTCAGTAATTGGAGTTATTCCATATGTGGGTCTCAACTTTGCTGTCTACGAGTCTTTAAAAGATTGGTTAATCAAATCTAAACCATTTGGTCTAGTTAATGATTCTTCTGAGTTGAGTGTGACAACTCGCCTAGCTTGTGGTGCTGCTGCTGGAACAGTTGGACAAACTCTTGCTTACCCTCTTGATGTCATTCGTCGAAGAATGCAGATGGTGGGTTGGAATCATGCTGCTTCTGTTCTAACTGGTAATGAAGGAGGTAAAGTCCCGCTAGAATACACTGGAATGGTTGATGCATTTAGGAAAACTGTTCGGCATGAAGGATTTGGTGCATTGTACAAGGGTCTGGTGCCCAATTCTGTAAAGGTGGTTCCATCCATAGCACTTGCATTTGTTACATATGAAGTGGTGAAGGACATTTTAGGAGTTGAGATTAGAATATCAGACTAA 1077 0.4373 MASSEDVKSGESAVTTIVNLAEEAKLAREGVVNKAPSYAVASICKSLVAGGVAGGVSRTAVAPLERMKILLQVQNPHNIKYNGTIQGLKYIWRNEGLRGLFKGNGTNCARIIPNSAVKFFSYEQASKGILYLYQQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPHALYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKPFGLVNDSSELSVTTRLACGAAAGTVGQTLAYPLDVIRRRMQMVGWNHAASVLTGNEGGKVPLEYTGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIALAFVTYEVVKDILGVEIRISD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0748 358 Gene3D Mitochondrial carrier domain 38 352 IPR023395 -
Lan2g0748 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 144 232 IPR018108 -
Lan2g0748 358 PANTHER BNAA09G39370D PROTEIN 3 353 - -
Lan2g0748 358 Pfam Mitochondrial carrier protein 42 127 IPR018108 -
Lan2g0748 358 Pfam Mitochondrial carrier protein 144 236 IPR018108 -
Lan2g0748 358 Pfam Mitochondrial carrier protein 247 350 IPR018108 -
Lan2g0748 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 128 IPR018108 -
Lan2g0748 358 SUPERFAMILY Mitochondrial carrier 42 345 IPR023395 -
Lan2g0748 358 PRINTS Mitochondrial carrier protein signature 46 59 IPR002067 GO:0055085
Lan2g0748 358 PRINTS Mitochondrial carrier protein signature 59 73 IPR002067 GO:0055085
Lan2g0748 358 PRINTS Mitochondrial carrier protein signature 103 123 IPR002067 GO:0055085
Lan2g0748 358 PRINTS Mitochondrial carrier protein signature 159 177 IPR002067 GO:0055085
Lan2g0748 358 PRINTS Mitochondrial carrier protein signature 205 223 IPR002067 GO:0055085
Lan2g0748 358 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Lan2g0748 358 PANTHER SOLUTE CARRIER FAMILY 25 3 353 - -
Lan2g0748 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 349 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0748 Lan-Chr2 15864575 15869859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0748 47 353 EF-hand Containing Proteins AT5G51050 37.662 2.91e-64 210
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0967 9 16229776 16234526 Lan2g0748 2 15864575 15869859 LSH
Lan2g0355 2 3340656 3344785 Lan2g0748 2 15864575 15869859 PCT
Lan2g0748 2 15864575 15869859 Lan2g0355 2 3340656 3344785 PCT