Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0733 ATGGATTCATGTTCAAGGCCTGTTATAGAAAAGAAAGCTCCTAAGCCACCACAAGAACCAGTGAATTGTCCAAGGTGCAGTTCAACTAATACCAAGTTCTGTTACTACAACAACTATAGCCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACAGAAGGTGGGTCTCTCAGAAATGTTCCTGTTGGAGGTGGTTCTAGAAAGAACAAGAAAGTTACCACAACCTCACCCTCAACCTCAGCAACATCAAAGGTTATTCCAGACCTAAACCCACCAACCCTCTCAATATCATCATCATCATCAGCTATAATTTCTAACTCTCAAAACCCTAAAGTAATGCAAGGATCAGGCCATGATCTTAACCTTGCTTTCCCTTCTATGGATCACAATTACCATGGCATGTCCTCATTTGTTGACATGGTTAATGGTGACACTAGTCATCACCAAAACTCTTCTGCTGGTCCAACTTCTCTTTCTGCTTTGGAGCTGTTAAGGTCTGGCATGGCTTCTAGGGGTTTGAATCCTTATGCTCCTAGTTCCTTGATGCCAAACTCAAGTTCCCTTTACCCTTCTGGGTTCCCCATGCAAGAAGTTAAAGCAAATCTTGGTTTCTCAGTTGATCATGGGGTTGGAAATAGATCATATCATGATCAGGTTCAAGAGAATGATGGAAGACTTTTGTTCCCTTTTGGAGATGTGAAGCAACAGCTTTCTCATGCTGGTAGTGCTGAAGTGGAACACAATAATAAGGAACAAGGAAATTCAGCAAGTACTGGATATTGGAGTGGAATGATTGGTGAAGGGTCATGGTAA 825 0.4182 MDSCSRPVIEKKAPKPPQEPVNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVTTTSPSTSATSKVIPDLNPPTLSISSSSSAIISNSQNPKVMQGSGHDLNLAFPSMDHNYHGMSSFVDMVNGDTSHHQNSSAGPTSLSALELLRSGMASRGLNPYAPSSLMPNSSSLYPSGFPMQEVKANLGFSVDHGVGNRSYHDQVQENDGRLLFPFGDVKQQLSHAGSAEVEHNNKEQGNSASTGYWSGMIGEGSW* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0733 274 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 16 269 - -
Lan2g0733 274 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Lan2g0733 274 MobiDBLite consensus disorder prediction 1 21 - -
Lan2g0733 274 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Lan2g0733 274 MobiDBLite consensus disorder prediction 242 274 - -
Lan2g0733 274 MobiDBLite consensus disorder prediction 63 95 - -
Lan2g0733 274 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
Lan2g0733 274 MobiDBLite consensus disorder prediction 245 268 - -
Lan2g0733 274 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 269 IPR045174 GO:0003700|GO:0006355
Lan2g0733 274 MobiDBLite consensus disorder prediction 72 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0733 Lan-Chr2 15485585 15487513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0733 17 274 C2C2-Dof Transcription Factor Family AT3G61850 48.936 4.69e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan2g0733 zf-Dof 6.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0733 - - gmx:778110 347.821