Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0355 ATGGCTTCAGAGACGAAGATCGTGAATCTGGCAGAGGAAGCAAAGCTTGCGAGAGAAGGTGTTAAGGCTCCTAGTTATGCTCTTCTCACTATCTCCAAATCTCTACTTGCTGGTGGTGTCGCTGGAGGAATATCACGGACAGCGGTTGCCCCACTTGAACGGATGAAAATTTTGCTGCAGGTCCAAAATTCCCACAACATAAAATACAATGGAACAATTCAAGGCCTAAAATATATATGGGGAACCGAAGGTTTTCGTGGGCTGTTCAAAGGGAATGGCACTAATTGTGCTCGAATTATCCCTAATTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAAGCTATACTACAGCTGTATCGGCAAAGAACTGGAAATGAGGATGCTCAGTTGACTCCTGTTTTACGTCTTGGAGCCGGATCATGTGCTGGAATAATCGCCATGTCTGCAACGTATCCAATGGACATGGTTCGAGGCAGGATAACTGTACAGACAGAGAAGTCCCCTTTCCATTACCGAGGAATGTTCCATGCTCTGTCAACTATACTTAAGGAAGAAGGCCCACGTGCTTTATATAAGGGCTGGGTTCCTTCAGTCATTGGAGTTATTCCTTATGCGGGTCTCAACTTTGCTGTGTATGAGTCTTTGAAAGATTGGTTAGTAACATCAAATCCTTTTGGTCTAGTTCAAGATTCTGAGTTGAGTGTGGTAACTCGCCTGGCATGTGGTGCCGCAGCTGGAACCGTTGGACAAACTGTTGCTTACCCTTTTGATGTCATTCGTCGAAGAATGCAGATGGTGGGTTGGAACCATGCTTCTTCTGTTGTAGCTGGTGATGGAAGAGCCAAGGCCCCACTTGAATACACTGGCATGGTTGATGCATTTAGGAAAACTGTCCGGTATGAGGGATTTGGTGCATTATTCAAGGGTCTGGTGCCCAATTCTGTAAAGGTGGTCCCATCAATAGCAATTGCTTTTGTAACATACGAGGTGGTGAAGGACATATTAGGAGTGGAGATCAGAATATCAGACTGA 1038 0.4509 MASETKIVNLAEEAKLAREGVKAPSYALLTISKSLLAGGVAGGISRTAVAPLERMKILLQVQNSHNIKYNGTIQGLKYIWGTEGFRGLFKGNGTNCARIIPNSAVKFFSYEQASKAILQLYRQRTGNEDAQLTPVLRLGAGSCAGIIAMSATYPMDMVRGRITVQTEKSPFHYRGMFHALSTILKEEGPRALYKGWVPSVIGVIPYAGLNFAVYESLKDWLVTSNPFGLVQDSELSVVTRLACGAAAGTVGQTVAYPFDVIRRRMQMVGWNHASSVVAGDGRAKAPLEYTGMVDAFRKTVRYEGFGALFKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEIRISD* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0355 345 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Lan2g0355 345 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Lan2g0355 345 PRINTS Mitochondrial carrier protein signature 91 111 IPR002067 GO:0055085
Lan2g0355 345 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Lan2g0355 345 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Lan2g0355 345 PRINTS Mitochondrial carrier protein signature 244 266 IPR002067 GO:0055085
Lan2g0355 345 PANTHER SOLUTE CARRIER FAMILY 25 3 340 - -
Lan2g0355 345 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER ADNT1 3 340 - -
Lan2g0355 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 220 IPR018108 -
Lan2g0355 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 235 336 IPR018108 -
Lan2g0355 345 Gene3D Mitochondrial carrier domain 28 339 IPR023395 -
Lan2g0355 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 116 IPR018108 -
Lan2g0355 345 SUPERFAMILY Mitochondrial carrier 30 332 IPR023395 -
Lan2g0355 345 Pfam Mitochondrial carrier protein 30 117 IPR018108 -
Lan2g0355 345 Pfam Mitochondrial carrier protein 234 337 IPR018108 -
Lan2g0355 345 Pfam Mitochondrial carrier protein 132 224 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0355 Lan-Chr2 3340656 3344785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0355 32 340 EF-hand Containing Proteins AT5G51050 39.355 1.01e-67 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0355 2 3340656 3344785 Lan9g0967 9 16229776 16234526 PCT
Lan2g0355 2 3340656 3344785 Lan2g0748 2 15864575 15869859 PCT
Lan9g0967 9 16229776 16234526 Lan2g0355 2 3340656 3344785 PCT
Lan2g0748 2 15864575 15869859 Lan2g0355 2 3340656 3344785 PCT