Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1099 ATGGAGAGTGGGTGGAAGATTAATACGGAGATATCACCAAATTGCCCTAGGTGTGGTTCTTCCAACACAAAGTTTTGCTATTACAATAACTACAGCTTAACTCAACCAAGGTATTTTTGCAAAGGCTGCAGAAGGTACTGGACCAAAGGAGGATCACTCCGGAATGTTCCGGTCGGCGGCGGATGCCGGAAAAACAGAAGAGGTAATAAGAACTTAAGACAATCCATTGACGGTCTTGCTTTCAAAAATTCACCCTGTGGTGGTGATGCTACCAAGAACCCAGTTGGTCATTCTTATGATCCTAGAATGACTTCATATTCTAGCTCCTCAATGGTAAGTGGACCAAATATTGATCTTGCAGTAGTTTATGCAAATTTCCTCACTCAAAAGCCAGATTCGGGTGCTGGGGTAGATGAGAATCATGATCAAATTCATGCAGTTTTTGATCATTCTCAAGAAAATTCAAGGCTATTATCTAACACAGAAATTGGCCCAAGTACTATTTTGCCTCAAGAACTTGGTCTTATTGGATGTTTGAATCTTCCAGAACAATCATCCACAGGATCCCGTTTTTGTGATGGTAATAACTCACTGTACTTTAGTGGGTTCAACTCTATGCAGATTCATCAAGAAGCTACAATTGAGCAATGTAATATTCATCATGATGCTCTCAATTTTGAGTTGCCTCCATTGCCAGGTGAAGAGGAAGTGTTACATGATATGATGTGGTCCAATTCTGAGATGATGCTAAACCATGCCTCTCGAGCCACCCAACCTTCACTTTTTCAATCTGAAGCTCATGATGATGCAAACTTGCTCGTCAATAATTGGAGCCCCTTCAATTTGGAAATGGATCCTTCTTTTCCCAAGCCTTGA 876 0.411 MESGWKINTEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKNLRQSIDGLAFKNSPCGGDATKNPVGHSYDPRMTSYSSSSMVSGPNIDLAVVYANFLTQKPDSGAGVDENHDQIHAVFDHSQENSRLLSNTEIGPSTILPQELGLIGCLNLPEQSSTGSRFCDGNNSLYFSGFNSMQIHQEATIEQCNIHHDALNFELPPLPGEEEVLHDMMWSNSEMMLNHASRATQPSLFQSEAHDDANLLVNNWSPFNLEMDPSFPKP* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1099 291 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Lan20g1099 291 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 285 - -
Lan20g1099 291 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 285 IPR045174 GO:0003700|GO:0006355
Lan20g1099 291 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Lan20g1099 291 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1099 Lan-Chr20 13684558 13685663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1099 8 285 C2C2-Dof Transcription Factor Family AT3G52440 39.100 4.72e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan20g1099 zf-Dof 4.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1099 - - aprc:113871380 343.969