Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1412 ATGGGTCTCTCCTCTCTCAACGTCTGCATGGATTCATCAGATCATTGGTTTCAGGGCACAGTTCAGGAGGTGTCCATGATAGATTCATATTCAATTTCATCACCATCTGCAGAAGACATGCTTACATGCTCAAAGCCCATGATAGATGAGAAGAATCTAAGACCCCCACAAGACCAAGCACTCAAGTGCCCAAGGTGTGATTCAACTCACACCAAGTTCTGCTACTACAACAACTACAGCCTCACCCAACCTAGGTACTTCTGCAAGACTTGTAAAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATCCCTGTTGGTGGTGGTTGTAGAAAAAACAAGAAAGTTTCTAATTCCAAGAAACCTAATAATGACCAAGCACCTATTATTACTCAAAACCAAGCACAACCAGGACTTGTAGTGTCTAATTCTTACCATCACTACCCCAAAGATATTCAACTTCCTTTCCAAGCTGATGTGCAATTTTCCCACCTCAACAATTTGCTTGGGGTTAGTGGTGAGGCACTTGGAAACCCTAGTTTTATGGAGAACCACCCTAGCCCTAATATTTCTAGGAATTTTGAATTTTTTGGAAATAGTGATATGGGTGTTGTTGGGCTTGGAGATAATGTGAATGGTTACAATGGGTTGTTACCTACAAATTATCAAGGTCTTTGCTTTGAGGGTATGACCCTTGATCATGGGAACAATGGTGGGAATTATAACCTAATAGACATGTGTCAGCGATTGATATTGCCTTACGATACAAGTGATCATAGCCAAAATGGTTCAATTCATGATGTGAAACTAGACCCTAAGCTATTGTCCCTTGAATGGAAAAACCAGGTTTATTCAGATCCTGAATATACTAACAGTTCAGGATCATGGAGTGGCATGATGAATGGCTATGGATCTTCCACAACAAACCCTTTGGTTTAG 939 0.4121 MGLSSLNVCMDSSDHWFQGTVQEVSMIDSYSISSPSAEDMLTCSKPMIDEKNLRPPQDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCKRYWTKGGTLRNIPVGGGCRKNKKVSNSKKPNNDQAPIITQNQAQPGLVVSNSYHHYPKDIQLPFQADVQFSHLNNLLGVSGEALGNPSFMENHPSPNISRNFEFFGNSDMGVVGLGDNVNGYNGLLPTNYQGLCFEGMTLDHGNNGGNYNLIDMCQRLILPYDTSDHSQNGSIHDVKLDPKLLSLEWKNQVYSDPEYTNSSGSWSGMMNGYGSSTTNPLV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1412 312 MobiDBLite consensus disorder prediction 111 133 - -
Lan1g1412 312 ProSiteProfiles Zinc finger Dof-type profile. 61 115 IPR003851 GO:0003677|GO:0006355
Lan1g1412 312 ProSitePatterns Zinc finger Dof-type signature. 63 99 IPR003851 GO:0003677|GO:0006355
Lan1g1412 312 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 191 306 IPR045174 GO:0003700|GO:0006355
Lan1g1412 312 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 184 IPR045174 GO:0003700|GO:0006355
Lan1g1412 312 Pfam Dof domain, zinc finger 58 115 IPR003851 GO:0003677|GO:0006355
Lan1g1412 312 PANTHER - 13 184 - -
Lan1g1412 312 PANTHER - 191 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1412 Lan-Chr1 23875223 23877044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1412 1 312 C2C2-Dof Transcription Factor Family AT5G62940 39.062 2.57e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan1g1412 zf-Dof 2.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1412 - - lang:109363070 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0834 12 15438864 15440743 Lan1g1412 1 23875223 23877044 LSH
Lan1g1412 1 23875223 23877044 Lan14g0318 14 6180926 6183228 PCT
Lan14g0318 14 6180926 6183228 Lan1g1412 1 23875223 23877044 PCT