Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0952 ATGCTCCTGTTGTCTGATTTTTTTTTCCAACTGAAGAAGTCATCACAGATGGAAGCACAAAGCTCTGACCATGCCCAAGTTATTGAAATCAGTGGACCTATTCCTGATGTAAGGAATCCAGAAGAAAGTAAGATTTGTGGGGAAGGACCATGTGGATTCGCAGATGCTGGATCCATCTCTAATGATTCTGAAGAACGATCAACTTCCATGCGAAAGCTTTTGATGGCAGTGGTCCTTTGTATTATTTTCATGACTGTTGAAATAGTTGGTGGCATCAAAGCTAACAGTCTCGCAATATTGACTGATGCAGCACATTTGCTTTCGGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACTCCCCGCCAGTCATATGGATTTTTTCGAATTGAGATACTTGGTGCTTTGGTTTCTATCCAAATGATATGGTTGCTTGCTGGGATTCTGGTATATGAAGCCATTGATAGAATCATTGCTGGCCCTCGCGAGGTGGATGGATTTTTAATGTTTTTAGTTTCTGCATTTGGTCTAGTGGTTAACATCCTCATGGCTTTTTTATTGGGGCATGATCATGGCCATGGTGGACATGATCATCACGGCCATGAGCATGGTCATCATGGCCACAACCATGGATATTCAGTGTCTACCCATCATGATGTAAAGCATACAATTACTGAGCACCGTCATACTCATGACGACCATGCAGACCATAATGATGAAAAGCATGGCCATGAAGACCACATACACCATCATGATCACAAGGAGGTCAATGAACCACTTCTTGGTGAATCAAAAGACGGGCATGAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTTCATGTACTTGGGGACTCTGTTCAGAGTGTTGGGGTGATGATTGGGGGAGCAGTGATATGGTATAAGCCTGAATGGCAAATAGTTGATTTGATTTGCACTTTAATCTTTTCAGTAATTGTTTTGGGGACTACTATCAATATGTTGAGAAACATATTGGAAGTCCTGATGGAGAGCACGCCGCGTGAGATTGATGCAACTAAGCTTGAAAGAGGGCTGTTGGAGATGGAAGAAGTAGTGGCTGTTCATGAGCTGCATATATGGGCCATTACAGTGGGGAAGGTTTTGCTAGCTTCTCATGTTAAAATCAGACCTGAAGCAAACGCAGACCTGGTGCTGGACAAGGTTATAAACTACATCAAAAGGGTTTATAATATCAGTCATGTAACTATACAGATTGAGCGCTAG 1275 0.4259 MLLLSDFFFQLKKSSQMEAQSSDHAQVIEISGPIPDVRNPEESKICGEGPCGFADAGSISNDSEERSTSMRKLLMAVVLCIIFMTVEIVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIDRIIAGPREVDGFLMFLVSAFGLVVNILMAFLLGHDHGHGGHDHHGHEHGHHGHNHGYSVSTHHDVKHTITEHRHTHDDHADHNDEKHGHEDHIHHHDHKEVNEPLLGESKDGHEKKQWNINVQGAYLHVLGDSVQSVGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLERGLLEMEEVVAVHELHIWAITVGKVLLASHVKIRPEANADLVLDKVINYIKRVYNISHVTIQIER* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0952 424 Gene3D Cation efflux protein transmembrane domain 69 345 IPR027469 -
Lan1g0952 424 Pfam Cation efflux family 73 346 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lan1g0952 424 TIGRFAM CDF: cation diffusion facilitator family transporter 70 424 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lan1g0952 424 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 347 IPR027469 -
Lan1g0952 424 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 17 424 - -
Lan1g0952 424 MobiDBLite consensus disorder prediction 215 261 - -
Lan1g0952 424 MobiDBLite consensus disorder prediction 202 261 - -
Lan1g0952 424 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 352 423 IPR036837 -
Lan1g0952 424 PANTHER METAL TOLERANCE PROTEIN A1 17 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0952 Lan-Chr1 20145452 20148853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0952 9 424 Inorganic Solute Cotransporters AT3G58810 63.420 4.36e-168 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0952 K14689 - gmx:100794876 632.484