Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0591 ATGGGAGATCTGGTTACTGAGAAACATGTTCGATATATATTATCAGTTGAAAAGAGGAAAGATGATTTTGAGTCTGTGGTAATGGAGCATCTAAGAATGAATGGGGCATACTGGGGACTGACTGCTCTAGATCTTATGGGAAAGCTTAACACTGTGGATGTTGATGAGGTTGTTTCATGGGTGTTGAGTTGTCAGCATGAATCAGGGGGATTTGGTGGAAATGTTGGACATGACCCTCACCTCCTCTATACACTAAGTGCTGTGCAGGTCTTGGCTCTCTTTCACAAGCTGGACATCATTGATGTAGATAAGGTGACAAACTATATTGTCGGTCTTCAAAATGAAGACGGGTCTTTTTCAGGGGATATATGGGGTGAAATTGATACGCGGTTCTCCTATATTGCTATTTGTTGTCTATCAATATTACACCACTTGGATAAAATCAATGTCGAGAAGGCCGTGAAGTATATTATAAGTTGCAAAAATATGGATGGTGGTTTTGGTTGCACACCTGGCGGGGAATCTCATGCTGGACAAATTTTCTGCTGTGTGGGAGCCCTTGCTATAACAGGGTCGCTAGATCTTGTTGACAAGGACCTGCTTGGCTGGTGGTTATGTGAGCGACAAGTTAAATCTGGAGGCCTGAATGGGCGTCCTGAGAAGCTCGCTGATGTCTGCTACTCATGGTGGGTTCTTTCTAGCTTGATCATGATTGATAGGGTCCATTGGATCAGTAAGGAGAAGCTTATAAAGTTTATCTTAGACTGCCAGGACACAGAAAATGGTGGAATTTCAGACAGGCCAGATGATGCTGTGGATGTCTTTCATACATACTTCGGGGTTGCTGGACTTTCACTTCTTGAATATCCAGGAGTGAAACCAATAGATCCAGCTTATGCTTTACCTGTTGATGTTGTAAATGGGATTTTCTTTAGTAAATAA 942 0.4246 MGDLVTEKHVRYILSVEKRKDDFESVVMEHLRMNGAYWGLTALDLMGKLNTVDVDEVVSWVLSCQHESGGFGGNVGHDPHLLYTLSAVQVLALFHKLDIIDVDKVTNYIVGLQNEDGSFSGDIWGEIDTRFSYIAICCLSILHHLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWISKEKLIKFILDCQDTENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGVKPIDPAYALPVDVVNGIFFSK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0591 313 PANTHER GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETA 1 311 - -
Lan1g0591 313 Pfam Prenyltransferase and squalene oxidase repeat 100 143 IPR001330 GO:0003824
Lan1g0591 313 Pfam Prenyltransferase and squalene oxidase repeat 197 239 IPR001330 GO:0003824
Lan1g0591 313 Pfam Prenyltransferase and squalene oxidase repeat 53 93 IPR001330 GO:0003824
Lan1g0591 313 Pfam Prenyltransferase and squalene oxidase repeat 148 191 IPR001330 GO:0003824
Lan1g0591 313 Pfam Prenyltransferase and squalene oxidase repeat 245 287 IPR001330 GO:0003824
Lan1g0591 313 Gene3D - 1 311 - -
Lan1g0591 313 CDD GGTase-II 4 287 IPR026873 GO:0004663|GO:0018344
Lan1g0591 313 PANTHER GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT 1 311 IPR045089 GO:0008318
Lan1g0591 313 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 3 308 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0591 Lan-Chr1 8567729 8575376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0591 K05956 - gmx:100793642 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0591 1 8567729 8575376 Lan19g0387 19 4874918 4877008 PCT
Lan19g0387 19 4874918 4877008 Lan1g0591 1 8567729 8575376 PCT