Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0614 ATGGCTAAAGTACAAAAAGGCCAAGAGATTCAAGGGATTAAGCTGTTTGGCACAACGATTAAATATAGTGAAGAAGAAGTAAAGGAGAGGCAAAAAGGAAAAGAAGATGAAACAGTGGAAAAGAAACCAGAGAAGATAATAGCTTGCCCAAGATGCAAGAGCATGGAAACAAAGTTCTGTTACTTCAACAACTACAACGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAGAGGTACTGGACGGCAGGTGGGGCCCTCCGCAACGTGCCGGTTGGTGCCGGGCGGCGGAAGGCGAAGCCACCGTGTCATGGTGGATTCCGGGAAGGTTGTCTCTATGAAACATCAAATGATGACAACAAGTTTGGGTTGGTTTTGGATGAGTGGGAAGTTGCGAGTGATTTCCGGCAGCCGTTTACGGCCAAGCGGTTGAGGATGAGCTCAGCATCAAGGTCAATAAATTCCCCACTTTCATTCACGAAGGCTTGA 489 0.4724 MAKVQKGQEIQGIKLFGTTIKYSEEEVKERQKGKEDETVEKKPEKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPPCHGGFREGCLYETSNDDNKFGLVLDEWEVASDFRQPFTAKRLRMSSASRSINSPLSFTKA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0614 162 Pfam Dof domain, zinc finger 45 100 IPR003851 GO:0003677|GO:0006355
Lan19g0614 162 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Lan19g0614 162 PANTHER CYCLIC DOF FACTOR 2 5 153 IPR045174 GO:0003700|GO:0006355
Lan19g0614 162 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Lan19g0614 162 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0614 Lan-Chr19 11518135 11520073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0614 8 152 C2C2-Dof Transcription Factor Family AT2G34140 53.488 1.29e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan19g0614 zf-Dof 4.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0614 - - tcc:18596691 203.371