Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0089 ATGATGAATCTTTTCAGAGAAATGATGAATCCTGTTGATAATATCAATCTCTACAATAGTCACCAAATGGGTTACGATTCATTACTGCCATTATCTGCCACCACTACTGCCGATAATATTTTCCGGCCACCGTGCAACACTTTCATCGCCGCTGATTCTTTCCCTCAGAAAACAGCCATGAATTCTGATAGCAGCCTCACCTACAATGTTCATAATTGTGATTCTTTCTCGTTCCTTGGTGAAGACCTTTCACTCCACTTACAGAAACAACAACAACAACAACTCAATATCAACAATATCATTTCTGAGCAAATTGAAAAGCTAAAGATGGAGGTAGTGGAAAAGAGAAAGAGAGAGACAAGGAAGATTATGGAAACAATTGAAGTTAGTGTAATGAAGAGAGTGAAAGCAAAAGAAAACGAGATAGAGAAAATTGGAAACCTAAATTATGGTTTAGAAGAGAAGGTAAAGTCTCTTTGCATGGAGAATAAAACATGGCGCAATTTAGCACAATCCAATGAAGCCACAGCCAATGCTCTTCGAAACATACTCGAGCAAGTCCTTACCCACGCTAATGGCGGAGCCACCATAAACCACGCCGGAGCAACCGTGCCGGCCAGTTCATGTTGTGGCAGCACGGACGGTGTGAAAAACAAAGAAAAAGACAAAGATGGTGTGTGGCGTAGGATAATAGGGTGCGCAGGAGTGAAGGATAAGGAAGGTGGTGGTGATAATAATAGTATTGGAAATAGTGATAGTAGGAGATTGTGTAGAAAGTGTGGGAAAGAAGAGTCATGTGTGGTGATATTACCATGCAGGCATTTGTGTTTGTGTACTATTTGTGGTTCTAATATCCACATTTGTCCTATTTGTAAATCTTTCAACACCGCAAGTGTCCATATTAACATGTCTTAG 915 0.4033 MMNLFREMMNPVDNINLYNSHQMGYDSLLPLSATTTADNIFRPPCNTFIAADSFPQKTAMNSDSSLTYNVHNCDSFSFLGEDLSLHLQKQQQQQLNINNIISEQIEKLKMEVVEKRKRETRKIMETIEVSVMKRVKAKENEIEKIGNLNYGLEEKVKSLCMENKTWRNLAQSNEATANALRNILEQVLTHANGGATINHAGATVPASSCCGSTDGVKNKEKDKDGVWRRIIGCAGVKDKEGGGDNNSIGNSDSRRLCRKCGKEESCVVILPCRHLCLCTICGSNIHICPICKSFNTASVHINMS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0089 304 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 55 303 - -
Lan19g0089 304 Pfam Zinc finger, C3HC4 type (RING finger) 254 293 - -
Lan19g0089 304 ProSiteProfiles Zinc finger RING-type profile. 257 292 IPR001841 -
Lan19g0089 304 Coils Coil 98 118 - -
Lan19g0089 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 303 IPR013083 -
Lan19g0089 304 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 55 303 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0089 Lan-Chr19 710484 711815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0089 74 293 Miscellaneous Gene Families AT4G39050 23.423 7.04e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0089 19 710484 711815 Lan9g0211 9 2606345 2608390 LSH
Lan19g0089 19 710484 711815 Lan7g0681 7 5693953 5695371 PCT
Lan19g0089 19 710484 711815 Lan13g0630 13 5280208 5281689 PCT
Lan7g0681 7 5693953 5695371 Lan19g0089 19 710484 711815 PCT
Lan13g0630 13 5280208 5281689 Lan19g0089 19 710484 711815 PCT