Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0052 ATGAAGTATGTGTTGGTGACAGGTGGTGTTGTTAGTGGACTTGGAAAAGGAGTCACTGCTAGCAGTATTGGGGTTCTCCTTAAGGCTTGTGGTCTTAGAATTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGGACTATGTCTCCTTTCGAGCATGGGGAGGTCTTTGTCTTAGATGACGGCGGCGAGGTTGACCTTGACCTTGGAAATTATGAACGTTTCTTGGACATCAAATTAACCCGTGATAACAATATCACTACCGGAAAAATATATCAGTCTGTTATTGCGAAGGAGAGAAGAGGAGATTATCTCGGAAAAACTGTCCAGGTTGTTCCACACATAACAGATGCCATCCAAGACTGGATAGAGCGTGTTGCACGGATACCAGTTGATGGGAAAGAAGGGCCAGCTGATGTTTGTGTCATCGAATTGGGTGGAACTATAGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGTCAATTTTCGCACCGTGTAGGCCCTGGCAACTTTTGTTTGATTCATGTTAGCCTGGTTCCTGTACTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTTCGGCAACTTAGAGGATTAGGTTTGACACCTAATCTTCTTGCTTGTCGTAGTACAAAGGAACTTGATGACAGTGTTAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGTTGTCAAACATAGTTACTCTCCATGATGTTCCAAATATTTGGCACATTCCTTTGCTTTTAAAAGATCAGAAGGCGCATGAGGCGATCCTGAAAACATTAAACTTGCTAAGTGTTGCTACAGAGCCTAATTTGAAGGACTGGACCACTAAGACGAAAGTTTACAATGACTTTCATGAAAATGTTAGAATTGCGATGGTGGGAAAATATACTGGTCTTTCTGATGCCTATCTTTCTGTTCTGAAGGCACTTTTACATGCTGCTGTCGCTCACAACCGTAAACTTATTGTGGACTGGGTTCCGGCTGGGGATCTTGAAGATGTTACTTTTAAACAGGATCCTGATGCATATAAAGTTGCTTGGGGACTTTTGAAGGGTGCTGACGGTGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAGGGGAAAATCCTTGCTGCGAAGTACGCTCGAGAAAATAATGTCCCATTTCTCGGCATTTGCTTGGGAATGCAAATTGCTGTCATTGAGTTCGCGCGATCTATCCTTGGTCTGCATGATACTACTAGCACAGAATTTGATCCCGAAGCCAAGAACCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGAGGAACTATGCGTCTTGGTTCAAGGAGAACTTATTTCCAAGTAGCTGATTGCAAATCTTCGAACTTGTATAGTAATGTAAGCTTTGTTGATGAGCGACATCGGCATAGATATGAGGTTAACCCTGACATGATATCACAGCTGGAGAGTGCTGGTCTATCTTTTGTCGGCAAAGATGAAACTGGGAGTCGCATGGAGATAGTTGAATTGCCTAGCCATCCTTTTTTTATTGGCGTACAATTTCACCCGGAGTTCAAGTCCAGACCAGGGAAACCTTCTCCCCTCTTCTCAGGACTAATAGCAGCAGCATGTGAAGTGAAGAGGGCAGTTATGTCACCAAGCTATGGCCAAACCAAATTAGCTAATGGAATATATAATGGACACTCACCAATACCGAAATCACACCAAAATGGAAAGGGTTCGAATACAACCAACAATTCCTTAAATGGTATCTATACGAATGGCAATGGCAACGGCGTATATGTAGACGGGAGTTTTTAG 1830 0.4301 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRITSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIAKERRGDYLGKTVQVVPHITDAIQDWIERVARIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSHRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSTKELDDSVKAKLAQFCHVPLSNIVTLHDVPNIWHIPLLLKDQKAHEAILKTLNLLSVATEPNLKDWTTKTKVYNDFHENVRIAMVGKYTGLSDAYLSVLKALLHAAVAHNRKLIVDWVPAGDLEDVTFKQDPDAYKVAWGLLKGADGVLVPGGFGDRGVQGKILAAKYARENNVPFLGICLGMQIAVIEFARSILGLHDTTSTEFDPEAKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADCKSSNLYSNVSFVDERHRHRYEVNPDMISQLESAGLSFVGKDETGSRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPLFSGLIAAACEVKRAVMSPSYGQTKLANGIYNGHSPIPKSHQNGKGSNTTNNSLNGIYTNGNGNGVYVDGSF* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0052 609 MobiDBLite consensus disorder prediction 570 593 - -
Lan19g0052 609 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Lan19g0052 609 PANTHER CTP SYNTHASE 1 574 IPR004468 GO:0003883|GO:0006221
Lan19g0052 609 Gene3D - 294 558 IPR029062 -
Lan19g0052 609 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Lan19g0052 609 Gene3D - 1 292 IPR027417 -
Lan19g0052 609 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Lan19g0052 609 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Lan19g0052 609 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Lan19g0052 609 SUPERFAMILY Class I glutamine amidotransferase-like 297 551 IPR029062 -
Lan19g0052 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Lan19g0052 609 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Lan19g0052 609 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Lan19g0052 609 PANTHER CTP SYNTHASE 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0052 Lan-Chr19 399326 406525 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0052 19 399326 406525 Lan5g0734 5 18698387 18705083 LSH
Lan13g0640 13 5381926 5388563 Lan19g0052 19 399326 406525 PCT