Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan18g0991 | ATGTCTGTCAGAGAAGAAGAACAACAACAACAACAACACTCTTCTTCCTTGTTCCTCTGTGAAGAACAACCACACACTTTGGACTTGGAGGAAGTGGAAGAACATTCTAGACCCAACAGCATCATCGAGGAAGAGTTTGAGAGTGATAACAATGACTCAACTTTAGTAAAGTCTCCATCTTTACGTTTGATTTTGTTGGACAATGACATGTTCAAGGAGGAACACCAAGAACTTCTCTCTCTACTCTCAAAACAGAGACACACCCTTTTGTGTTCTTATACCAATGTGGCTCCTCTTGTTGAGGTTCCTCTTCGCTATGATGCTGTGATGTGGATTTCTAAGGTTTCAGTGATCCATGGTTTCACTGCTTTGACCACTGTTCTTGCTGTTAACTACTTTGATAGGTTTATAACCAGCCTAAGGTTTCAAATGGATAAGCCATGGATCACTCACCTCACTGCTGTTGCTTGTTTATCTCTTGCTGCTAAAATGGAAGAGACCCATGTTCCACTTCTTTTAGACCTCCAAGTTATGGAATCAAGGTTTTTGTTTGAAGCAAAGTCTATACAGAGAATGGAGCTTCTAGTGTTGTCCACTCTAAAATGGAGGATGAATCCTGTGACCCCAATTTCCTTCATTGAACACTTTGTAAGAAGGTTTGGTCTAAAGAGTCCCTTGCACTGGGAGTTTCTTCGGAGATCTGAAAGAGTTCTTCTGTCTGTCATTGCAGATTCTAGGGTTATGAGTTTTCTTCCTTCAACATTGGCTGCTGCTACAATGATCCATGTTATTAAAGATATCGATCCATTTAATGCAATGGAATGCAGAACTCAACTTCTGGCTTTACTCAAAACTGCAGAGGCGTTCATAATCTCGGGCAGAAGCGCAAATGCTTATCTGGACCAACTAACTCGGGCGATGGTGTCATGGATGCGTCGTTCAGTTATGACAGCTCAAATAATTCATGGACTGAGGCATCATCAGTCACAGTTGAGCCAGTGTTTAAGAGGAGCAAAGTTTCATTATAAAAGTTGTATACATTGCTGGCCAAGCATTTGGAAATCAATGAAGCAAAGATACTCCACTCCTTCTCCACTCTGTTGTGTGAGTGGAACAAGGATCTAA | 1125 | 0.4133 | MSVREEEQQQQQHSSSLFLCEEQPHTLDLEEVEEHSRPNSIIEEEFESDNNDSTLVKSPSLRLILLDNDMFKEEHQELLSLLSKQRHTLLCSYTNVAPLVEVPLRYDAVMWISKVSVIHGFTALTTVLAVNYFDRFITSLRFQMDKPWITHLTAVACLSLAAKMEETHVPLLLDLQVMESRFLFEAKSIQRMELLVLSTLKWRMNPVTPISFIEHFVRRFGLKSPLHWEFLRRSERVLLSVIADSRVMSFLPSTLAAATMIHVIKDIDPFNAMECRTQLLALLKTAEAFIISGRSANAYLDQLTRAMVSWMRRSVMTAQIIHGLRHHQSQLSQCLRGAKFHYKSCIHCWPSIWKSMKQRYSTPSPLCCVSGTRI* | 375 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan18g0991 | 374 | Gene3D | - | 90 | 205 | - | - | |
| Lan18g0991 | 374 | Gene3D | - | 84 | 283 | - | - | |
| Lan18g0991 | 374 | CDD | CYCLIN | 104 | 197 | IPR013763 | - | |
| Lan18g0991 | 374 | SMART | cyclin_7 | 110 | 198 | IPR013763 | - | |
| Lan18g0991 | 374 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Lan18g0991 | 374 | SUPERFAMILY | Cyclin-like | 189 | 264 | IPR036915 | - | |
| Lan18g0991 | 374 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Lan18g0991 | 374 | Pfam | Cyclin, N-terminal domain | 92 | 205 | IPR006671 | - | |
| Lan18g0991 | 374 | Pfam | Cyclin, C-terminal domain | 207 | 285 | IPR004367 | - | |
| Lan18g0991 | 374 | PANTHER | CYCLINS | 7 | 286 | IPR039361 | - | |
| Lan18g0991 | 374 | PANTHER | CYCLIN-D3-2 | 7 | 286 | - | - | |
| Lan18g0991 | 374 | SUPERFAMILY | Cyclin-like | 78 | 205 | IPR036915 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan18g0991 | Lan-Chr18 | 14982289 | 14984432 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan18g0991 | 1 | 283 | Core Cell Cycle Gene Families | AT4G34160 | 44.948 | 3.91e-78 | 243 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan14g0893 | 14 | 15520360 | 15522235 | Lan18g0991 | 18 | 14982289 | 14984432 | ECH | |
| Lan18g0991 | 18 | 14982289 | 14984432 | Lan18g0991 | 18 | 14982289 | 14984432 | ECH | |
| Lan17g1288 | 17 | 21131841 | 21134031 | Lan18g0991 | 18 | 14982289 | 14984432 | LSH | |
| Lan18g0991 | 18 | 14982289 | 14984432 | Lan8g0498 | 8 | 7235861 | 7238508 | PCT | |
| Lan18g0991 | 18 | 14982289 | 14984432 | Lan20g0423 | 20 | 2949866 | 2952818 | PCT | |
| Lan18g0991 | 18 | 14982289 | 14984432 | Lan4g1487 | 4 | 23982629 | 23984641 | PCT | |
| Lan17g1288 | 17 | 21131841 | 21134031 | Lan18g0991 | 18 | 14982289 | 14984432 | PCT |