Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0475 ATGGGTCTCGTTTCGAATCAACGAGGCTCTAGAACAGAGACGACCCAAGAAGGTTTACCGGTTACCGTTTCATCAGGTGGTGGAGCTGTTCCGAAGAAGAAATGGTCCAATTTAATGCCTCTCTTTGTGATCCTTGTGGTCATTGCAGAGATTGCGTTTCTGTGTAAACTTGATATGGTAAAAAACGCATCTATGGTTGATACCTTTGCTGACCTGTTCTACCGGTCACGGGTAGTGGTTGAAGGTGGTGTTGATGGTGATGGTGATGATGATTCGAGGTTAGCTGTTATAAGTAGTGTTCGGAATTCTGTAGAAGAGAGTTGTGAGGAATGGTTGGAGAGAGAGGATGGTGTTACATATTTAAGGGATTTTACAAAGGATCCTGTTATTGTTTCTGGAGCTGACCAGGATTGGAAATCGTGTTCAGTGGGATGTAAATTTGGGTTTAATCAGGATATGAAACTTGATGCTGTGTTTGGAGAACCTCAAGCTGGAGTAGCAAGTATTCTGAGATCAATGGAATCAGCTGAATACTATCATGTGAACAATATTGACACGGCACGACGGAAGGGGTATAACATTGTAATGACAACCAGTCTATCATCTGATGTACCTGTTGGATATTTTTCGTGGGCTGAGTATGACATCATGGCACCGGTAGAGCCAAAAACTGAAAGTGCTCTTGCAGCTGCGTTCATTTCAAATTGTGGAGCTAACAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAATGCAAACATCAAGATTGATTCTTATGGTGCTTGTCATAGGAACCATGATGGAAGAGTGAACAAAGTGGAAACCCTGAAGCGCTACAAGTTTAGCTTAGCATTTGAAAATTCTAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTAGTGGCTGGAACTGTCCCTGTGTTTGTTGGTGCTCCAAATATTGAGGATTTTGCTCCTTATCCTGGTTCTGTTTTACATATTAAAAAGCTAGAAGATGCTGAATCCATTGCCAAGACCATGAAACATCTAGCAGAAAATCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAAGGCCCGTCTGATTCCTTCAAGGCCCTTGTGGATATGGCCGCTGTGCATTCATCTTGCCGCCTTTGCATTCATGTGGCCACAACGATTAGAGAGAATGAAGAAAAGAGCCCAGCCTTCAAGAAACGCCCTTGCAAGTGCACTAGAGGGTCAGAAACTGTACATCATATCTATGTGAGAGAAAGGGGAAGATTTGAGACAGAGTCAATTTACTTGAGGTCTAGTAATTTAACACTCGAGGCCTTGAAATCTGCGGTCGCATTGAAGTTCAAATCCCTGAATCATGTACCTATATGGAAGCCAGAAAGACCTGAAATTCTAAGGGGAGACAATGAATTGAAAATTTACAGAATATACCCTATTGGCTTGACACAGAGACAAGCTCTTTATTCCTTCAGCTTCAAAGGGGATGAGGATTTCAGGAATCACTTAGATAGAAATCCTTGTGCAAAGTTTGAAGTCATTTTTGTGTAG 1554 0.4183 MGLVSNQRGSRTETTQEGLPVTVSSGGGAVPKKKWSNLMPLFVILVVIAEIAFLCKLDMVKNASMVDTFADLFYRSRVVVEGGVDGDGDDDSRLAVISSVRNSVEESCEEWLEREDGVTYLRDFTKDPVIVSGADQDWKSCSVGCKFGFNQDMKLDAVFGEPQAGVASILRSMESAEYYHVNNIDTARRKGYNIVMTTSLSSDVPVGYFSWAEYDIMAPVEPKTESALAAAFISNCGANNFRLQALEALENANIKIDSYGACHRNHDGRVNKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVFVGAPNIEDFAPYPGSVLHIKKLEDAESIAKTMKHLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHVATTIRENEEKSPAFKKRPCKCTRGSETVHHIYVRERGRFETESIYLRSSNLTLEALKSAVALKFKSLNHVPIWKPERPEILRGDNELKIYRIYPIGLTQRQALYSFSFKGDEDFRNHLDRNPCAKFEVIFV* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0475 517 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 226 391 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lan18g0475 517 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 34 494 - -
Lan18g0475 517 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 34 494 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lan18g0475 517 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 136 393 - -
Lan18g0475 517 MobiDBLite consensus disorder prediction 1 22 - -
Lan18g0475 517 MobiDBLite consensus disorder prediction 1 23 - -
Lan18g0475 517 Gene3D - 171 366 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0475 Lan-Chr18 9124783 9131322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0475 1 517 Xyloglucan Fucosyltransferase1 AT3G19280 65.458 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0475 K00753 - gmx:100776065 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0807 6 7443591 7452013 Lan18g0475 18 9124783 9131322 LSH
Lan18g0475 18 9124783 9131322 Lan17g0728 17 6721855 6728904 LSH