Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0131 ATGTATAACCTAGTTCTGGACCCTGCAATATACTGTCTAAATTATTTAAACCATTTGTTTGTAGGCAACTACAGTGTGAGTCCAAACAAAGCAATCAAGGTCCCGTTCCCATGCAGGTGCAACAACGGGACGGGTCTGTCGGACCAGGTTCCGGTGTACACAATAAAGACCGGAGATACTTTGTACGACATAGCCACCACCACTTTTGCAGGGTTGGTCAAGTATCCCCAGATCCAGGAAGCAAATAATATATCTGATGCAAATACAATACAAGTTGAGGATAAGTTGTGGATCCCATTGCCATGTAGTTGTGATAAGGTTGGTGGGGTGAGTGTGGTTCATTATGGACACATTGTGGAGTTAGGAAATAGTGTTGAAGGGATTGCTGATGAATATGGAACTACACAACAAATACTTCTAACCCTTAATGGGATCATTGACCCTAAGACTCTTCAAGCTGGTCAACTTCTTGATGTTCCACTCAAAGCTTGTTCTTCAAATGTAAGGAATGACTCATTGGATTACCCTTTGCTTGTTGCAAATGCTACTTACATCTACACTGCTAATAACTGCATCAAATGCATGTGTAGTGTGTTTTATATTGTCGGCAAATCATTTACCATTGACTTTTAA 633 0.4076 MYNLVLDPAIYCLNYLNHLFVGNYSVSPNKAIKVPFPCRCNNGTGLSDQVPVYTIKTGDTLYDIATTTFAGLVKYPQIQEANNISDANTIQVEDKLWIPLPCSCDKVGGVSVVHYGHIVELGNSVEGIADEYGTTQQILLTLNGIIDPKTLQAGQLLDVPLKACSSNVRNDSLDYPLLVANATYIYTANNCIKCMCSVFYIVGKSFTIDF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0131 210 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 23 197 - -
Lan18g0131 210 SMART LysM_2 52 99 IPR018392 -
Lan18g0131 210 SMART LysM_2 116 160 IPR018392 -
Lan18g0131 210 ProSiteProfiles LysM domain profile. 51 98 IPR018392 -
Lan18g0131 210 SUPERFAMILY LysM domain 52 100 IPR036779 -
Lan18g0131 210 Pfam LysM domain 117 160 IPR018392 -
Lan18g0131 210 Pfam LysM domain 53 99 IPR018392 -
Lan18g0131 210 ProSiteProfiles LysM domain profile. 115 159 IPR018392 -
Lan18g0131 210 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 23 197 - -
Lan18g0131 210 Gene3D LysM domain 50 107 IPR036779 -
Lan18g0131 210 Gene3D LysM domain 112 173 IPR036779 -
Lan18g0131 210 CDD LysM 52 98 IPR018392 -
Lan18g0131 210 CDD LysM 117 159 IPR018392 -
Lan18g0131 210 SUPERFAMILY LysM domain 116 160 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0131 Lan-Chr18 1054185 1055889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0131 26 199 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 54.023 4.76e-63 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0131 - - lang:109332455 435.261