Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1288 ATGTCTCTCATAGAACAACAATCCCAACATTCACAACAACGTTCTCCTTCAATCCTTGATACCCTTCTATGTGAAGAACAACATATATTTGAGGAAGGAGAAGATTTTGTGACAAAAAATGATGATGGGTCTTCATTATCAGTGACAAAGTTTCAATCTTTGCATTTAGTTTTGTTGGAGAATGATTTGTTATGGGAACATGAAGAGCTTGTGTCATTAATTTCAAGAGAGAGAGAAACCCATTTGACCCATTTGATTTTTGATGGATCCTTAAAGGAACATCGTGTTGAAGCTGTGAGTTGGATTTCTAAAGTGTGTGCACATTTTGGGTTCTATGCTTTGACCAATGTTCTTGCTGTGAACTACTTTGATAGGTTCATTACAAATCTCAGGTTTCAGAATGATAAACCATGGATGACACAACTTGTTGCTGTTACTTGTTTGTCTCTTGCTGCCAAAATGGAAGAAACCTATGTGCCACTCCTTTTGGACCTTCAAGTGGAAGAATCGAGATTTGTGTTTGAAGCGAAGACTATACAGAGAATGGAGTTGATAGTGTTGTCGACTCTTAAATGGAGGATGAGTCCAGTGACCCCAATTTCCTTCTTCGAACACATTGTCAGAAGACTTGGTTTAAAGAGCCGTTTGCATTGGGAGTTTCGGTGGCGTTGTGAGCGAATTCTTCTTAATGTCATAGCCGATTCAAGTGTTACGAGTTATCTCCCTTCTATGCTGGCTGCTGCTACAATGATCCATGTTATTAAGGAGATTGAACCATTTAATGCAACTCACTACATTGATCAACTTCTGGGTTTACTCAAGATTAGTGAGGAACAAGTGAGCCAGTGCCATAAACTCATACTGAAACTATTAGTTTGCAACGAACGCATTCACAACCTTCGCCAGAAACGCAAGCGCCTATCTGGACCAAGTAGCCCAGGTGGTGTCATTGATGCATCTTTCAGTTGCGGTAGCTCAAATGATTCATGGACCGACACATCGCCAGTCTCGCATTCACGGGAACCACTGTTCAAGAAGAGCAGAGCTCAGGAACAGAAGATGCGGTTGCCTTCTGTTAATCATGTGTCTATTGATGTTCGTAATATCCCCCGTAAATAA 1119 0.4075 MSLIEQQSQHSQQRSPSILDTLLCEEQHIFEEGEDFVTKNDDGSSLSVTKFQSLHLVLLENDLLWEHEELVSLISRERETHLTHLIFDGSLKEHRVEAVSWISKVCAHFGFYALTNVLAVNYFDRFITNLRFQNDKPWMTQLVAVTCLSLAAKMEETYVPLLLDLQVEESRFVFEAKTIQRMELIVLSTLKWRMSPVTPISFFEHIVRRLGLKSRLHWEFRWRCERILLNVIADSSVTSYLPSMLAAATMIHVIKEIEPFNATHYIDQLLGLLKISEEQVSQCHKLILKLLVCNERIHNLRQKRKRLSGPSSPGGVIDASFSCGSSNDSWTDTSPVSHSREPLFKKSRAQEQKMRLPSVNHVSIDVRNIPRK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1288 372 PANTHER CYCLIN-D3-2 7 354 - -
Lan17g1288 372 SMART cyclin_7 100 188 IPR013763 -
Lan17g1288 372 CDD CYCLIN 94 187 IPR013763 -
Lan17g1288 372 Gene3D - 196 285 - -
Lan17g1288 372 PANTHER CYCLINS 7 354 IPR039361 -
Lan17g1288 372 Pfam Cyclin, C-terminal domain 197 301 IPR004367 -
Lan17g1288 372 SUPERFAMILY Cyclin-like 65 194 IPR036915 -
Lan17g1288 372 SUPERFAMILY Cyclin-like 198 296 IPR036915 -
Lan17g1288 372 SMART Cyclin_C_2 197 325 IPR004367 -
Lan17g1288 372 MobiDBLite consensus disorder prediction 326 357 - -
Lan17g1288 372 Pfam Cyclin, N-terminal domain 92 195 IPR006671 -
Lan17g1288 372 Gene3D - 92 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1288 Lan-Chr17 21131841 21134031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1288 4 368 Core Cell Cycle Gene Families AT5G67260 47.340 5.83e-107 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1288 17 21131841 21134031 Lan18g0991 18 14982289 14984432 LSH
Lan17g1288 17 21131841 21134031 Lan8g0498 8 7235861 7238508 PCT
Lan17g1288 17 21131841 21134031 Lan20g0423 20 2949866 2952818 PCT
Lan17g1288 17 21131841 21134031 Lan4g1487 4 23982629 23984641 PCT
Lan17g1288 17 21131841 21134031 Lan17g1288 17 21131841 21134031 PCT
Lan17g1288 17 21131841 21134031 Lan18g0991 18 14982289 14984432 PCT