Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0694 ATGGGTTTGAGTTCTGAGCAAGTTTCTAGCAGTGGACTTGATTGGAACAATAACTTAATGGAAGCTCAAAAGTTAGAGCTTCTTCCAAAGCCTCATCATAATGAGATGAAGAAATCATCAGAGAGTTTAAAGTGCCCAAGATGTGACTCAACAAACACCAAATTTTGTTACTACAATAACTACAATAAGTCTCAGCCTCGCCATTTCTGCAGAGATTGCAAGAGGCACTGGACTAAAGGTGGAACTCTTAGAAATGTTCCTGTTGGTGGTGTTAGGAAGAATAAAAGGTTAAAAAAACCAACAACAACAACAACCTCTTGCACCCTCACAACTTCAACTTCTATAGTGGATGGTGTTTTGAGTAGCAACATGAATAATATTCAAACTTCTCTTGCAGTGAGTGATCAGAAAAACATGCCTTCATCTTCACTCTATCAAGCAATGATTCGTCCATCATCTTTGCTGCTACAACAACAGAATCTGATGAACATGAGAGACTTAGAAAGTAAAGATTTTGGTATTGGTAATGGCATGACTTTGAGTTCAACTTTGCCTCTTCATCAAAACCAAACCTTACTTTTTCCTTTCTCAACCTCTTTTTACACAAACCCATGTTCAGTATCAACAACATCTTTAAGGTCATCATCAAATGTTTATAACTATGTGGAGGAGTCAACCATCAACAGTGTAATACCAAGCACTAGTAGTGGTATTAACACACAGACATTGGAGATACCAGCAACAAGTGGTGGGATAGGAATGTCCAATTATTGGAGTTGGGAGGATATTGATTCATTTGTCTCAACTGATCTTAAGAATCCATGGGATGATTCTGATATCAAACCTTGA 849 0.3769 MGLSSEQVSSSGLDWNNNLMEAQKLELLPKPHHNEMKKSSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRDCKRHWTKGGTLRNVPVGGVRKNKRLKKPTTTTTSCTLTTSTSIVDGVLSSNMNNIQTSLAVSDQKNMPSSSLYQAMIRPSSLLLQQQNLMNMRDLESKDFGIGNGMTLSSTLPLHQNQTLLFPFSTSFYTNPCSVSTTSLRSSSNVYNYVEESTINSVIPSTSSGINTQTLEIPATSGGIGMSNYWSWEDIDSFVSTDLKNPWDDSDIKP* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0694 282 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Lan17g0694 282 PANTHER OS06G0284500 PROTEIN 36 222 - -
Lan17g0694 282 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Lan17g0694 282 Pfam Dof domain, zinc finger 42 95 IPR003851 GO:0003677|GO:0006355
Lan17g0694 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 222 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0694 Lan-Chr17 6121971 6123235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0694 43 100 C2C2-Dof Transcription Factor Family AT1G28310 81.356 2.52e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan17g0694 zf-Dof 3.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0694 - - gmx:100818111 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0694 17 6121971 6123235 Lan6g0713 6 6326058 6327339 LSH
Lan17g0694 17 6121971 6123235 Lan4g0694 4 9369112 9370959 PCT
Lan17g0694 17 6121971 6123235 Lan16g0124 16 985331 987058 PCT
Lan4g0694 4 9369112 9370959 Lan17g0694 17 6121971 6123235 PCT
Lan16g0124 16 985331 987058 Lan17g0694 17 6121971 6123235 PCT